Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.23□□□□□ -1.57
CD248Q9HCU0 PDSS1P2-201ENST00000449397 678 ntBASIC5.23□□□□□ -1.57
CD248Q9HCU0 RPL30P9-201ENST00000465586 330 ntBASIC5.23□□□□□ -1.57
CD248Q9HCU0 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.23□□□□□ -1.57
CD248Q9HCU0 ACTG1P13-201ENST00000486987 1043 ntBASIC5.23□□□□□ -1.57
CD248Q9HCU0 RNF138P1-201ENST00000502765 546 ntBASIC5.23□□□□□ -1.57
CD248Q9HCU0 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC5.23□□□□□ -1.57
CD248Q9HCU0 AC006427.1-201ENST00000514359 712 ntBASIC5.23□□□□□ -1.57
CD248Q9HCU0 RNA5SP360-201ENST00000516555 118 ntBASIC5.23□□□□□ -1.57
CD248Q9HCU0 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD248Q9HCU0 OR5AQ1P-201ENST00000527596 927 ntBASIC5.23□□□□□ -1.57
CD248Q9HCU0 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.23□□□□□ -1.57
CD248Q9HCU0 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.23□□□□□ -1.57
CD248Q9HCU0 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.23□□□□□ -1.57
CD248Q9HCU0 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.23□□□□□ -1.57
CD248Q9HCU0 AL133457.1-201ENST00000564251 987 ntBASIC5.23□□□□□ -1.57
CD248Q9HCU0 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.23□□□□□ -1.57
CD248Q9HCU0 MIR4666A-201ENST00000580160 79 ntBASIC5.23□□□□□ -1.57
CD248Q9HCU0 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.23□□□□□ -1.57
CD248Q9HCU0 AC233280.2-201ENST00000603917 1070 ntBASIC5.23□□□□□ -1.57
CD248Q9HCU0 AP004607.9-201ENST00000618202 316 ntBASIC5.23□□□□□ -1.57
CD248Q9HCU0 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC5.23□□□□□ -1.57
CD248Q9HCU0 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.23□□□□□ -1.57
CD248Q9HCU0 AC019278.1-201ENST00000623516 479 ntBASIC5.23□□□□□ -1.57
CD248Q9HCU0 AC024023.1-201ENST00000624530 922 ntBASIC5.23□□□□□ -1.57
CD248Q9HCU0 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CD248Q9HCU0 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CD248Q9HCU0 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.23□□□□□ -1.57
CD248Q9HCU0 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CD248Q9HCU0 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.23□□□□□ -1.57
CD248Q9HCU0 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.23□□□□□ -1.57
CD248Q9HCU0 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.23□□□□□ -1.57
CD248Q9HCU0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.23□□□□□ -1.57
CD248Q9HCU0 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CD248Q9HCU0 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.23□□□□□ -1.57
CD248Q9HCU0 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.23□□□□□ -1.57
CD248Q9HCU0 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.23□□□□□ -1.57
CD248Q9HCU0 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
CD248Q9HCU0 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 Y_RNA.160-201ENST00000363677 92 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 RNA5SP428-201ENST00000365129 132 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 RNA5SP455-201ENST00000365190 119 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 Y_RNA.402-201ENST00000383972 102 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 Y_RNA.573-201ENST00000384763 105 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 RPL31P52-201ENST00000407532 367 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 RNU6-575P-201ENST00000411326 105 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 AC013404.1-201ENST00000413068 249 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 COX6B1P1-201ENST00000415962 213 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 AC092647.1-201ENST00000420654 287 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 ELOCP14-201ENST00000428070 331 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 ELOCP7-201ENST00000439968 331 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 HMGB3P21-201ENST00000452483 547 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 SNORD42A-201ENST00000459584 64 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 RBM43P1-201ENST00000476891 1081 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CD248Q9HCU0 AC134698.5-201ENST00000519444 336 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 HIGD1AP5-201ENST00000529959 259 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 PSMB7P1-201ENST00000556349 514 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 AC009117.1-201ENST00000563948 554 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 AC008752.3-201ENST00000588113 712 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 AC011487.3-201ENST00000593607 453 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 MEMO1P5-201ENST00000604810 406 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 EIF3FP1-201ENST00000613970 806 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 MIR6839-201ENST00000620425 113 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD248Q9HCU0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD248Q9HCU0 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD248Q9HCU0 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD248Q9HCU0 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD248Q9HCU0 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 IRF5P1-201ENST00000504852 2164 ntBASIC5.22□□□□□ -1.57
CD248Q9HCU0 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD248Q9HCU0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.22□□□□□ -1.57
CD248Q9HCU0 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD248Q9HCU0 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
CD248Q9HCU0 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms