Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 SAGE4P-201ENST00000442271 3381 ntBASIC4.53□□□□□ -1.68
SCAPERQ9BY12 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCAPERQ9BY12 AL672167.1-206ENST00000356293 943 ntBASIC4.53□□□□□ -1.68
SCAPERQ9BY12 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SCAPERQ9BY12 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SCAPERQ9BY12 FTH1P1-201ENST00000437933 532 ntBASIC4.53□□□□□ -1.68
SCAPERQ9BY12 AL357520.1-201ENST00000441557 453 ntBASIC4.53□□□□□ -1.68
SCAPERQ9BY12 OR4C2P-201ENST00000530855 1064 ntBASIC4.53□□□□□ -1.68
SCAPERQ9BY12 AC024153.1-201ENST00000603103 365 ntBASIC4.53□□□□□ -1.68
SCAPERQ9BY12 AC243829.7-201ENST00000633081 225 ntBASIC4.53□□□□□ -1.68
SCAPERQ9BY12 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCAPERQ9BY12 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SCAPERQ9BY12 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCAPERQ9BY12 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.53□□□□□ -1.68
SCAPERQ9BY12 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SCAPERQ9BY12 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.52□□□□□ -1.69
SCAPERQ9BY12 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
SCAPERQ9BY12 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.52□□□□□ -1.69
SCAPERQ9BY12 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SCAPERQ9BY12 OR13C3-201ENST00000374781 1108 ntBASIC4.52□□□□□ -1.69
SCAPERQ9BY12 RN7SKP285-201ENST00000410137 318 ntBASIC4.52□□□□□ -1.69
SCAPERQ9BY12 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SCAPERQ9BY12 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.52□□□□□ -1.69
SCAPERQ9BY12 RPL21P40-201ENST00000428586 483 ntBASIC4.52□□□□□ -1.69
SCAPERQ9BY12 MYL8P-204ENST00000431574 518 ntBASIC4.52□□□□□ -1.69
SCAPERQ9BY12 RPS6P12-201ENST00000432491 726 ntBASIC4.52□□□□□ -1.69
SCAPERQ9BY12 AC087499.2-201ENST00000432861 149 ntBASIC4.52□□□□□ -1.69
SCAPERQ9BY12 AC092045.1-201ENST00000495716 1231 ntBASIC4.52□□□□□ -1.69
SCAPERQ9BY12 RN7SKP60-201ENST00000516985 239 ntBASIC4.52□□□□□ -1.69
SCAPERQ9BY12 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SCAPERQ9BY12 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SCAPERQ9BY12 AC095050.2-201ENST00000510748 1458 ntBASIC4.52□□□□□ -1.69
SCAPERQ9BY12 AC007496.3-201ENST00000624987 3443 ntBASIC4.52□□□□□ -1.69
SCAPERQ9BY12 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SCAPERQ9BY12 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SCAPERQ9BY12 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SCAPERQ9BY12 RNU6-851P-201ENST00000384565 107 ntBASIC4.51□□□□□ -1.69
SCAPERQ9BY12 RNU2-52P-201ENST00000410680 190 ntBASIC4.51□□□□□ -1.69
SCAPERQ9BY12 AL592148.1-201ENST00000413568 445 ntBASIC4.51□□□□□ -1.69
SCAPERQ9BY12 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SCAPERQ9BY12 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.51□□□□□ -1.69
SCAPERQ9BY12 NPM1P24-201ENST00000428039 894 ntBASIC4.51□□□□□ -1.69
SCAPERQ9BY12 EEF1B2P7-201ENST00000451177 676 ntBASIC4.51□□□□□ -1.69
SCAPERQ9BY12 AC006539.3-201ENST00000454258 129 ntBASIC4.51□□□□□ -1.69
SCAPERQ9BY12 AC091544.1-201ENST00000484702 348 ntBASIC4.51□□□□□ -1.69
SCAPERQ9BY12 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.51□□□□□ -1.69
SCAPERQ9BY12 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.51□□□□□ -1.69
SCAPERQ9BY12 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.51□□□□□ -1.69
SCAPERQ9BY12 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.51□□□□□ -1.69
SCAPERQ9BY12 AL049874.4-201ENST00000557593 255 ntBASIC4.51□□□□□ -1.69
SCAPERQ9BY12 AGGF1P8-201ENST00000562979 1000 ntBASIC4.51□□□□□ -1.69
SCAPERQ9BY12 AC091903.1-201ENST00000624322 454 ntBASIC4.51□□□□□ -1.69
SCAPERQ9BY12 AC007342.7-201ENST00000624610 2337 ntBASIC4.51□□□□□ -1.69
SCAPERQ9BY12 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.51□□□□□ -1.69
SCAPERQ9BY12 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC4.51□□□□□ -1.69
SCAPERQ9BY12 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SCAPERQ9BY12 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SCAPERQ9BY12 AC134882.1-201ENST00000603738 1676 ntBASIC4.5□□□□□ -1.69
SCAPERQ9BY12 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SCAPERQ9BY12 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SCAPERQ9BY12 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SCAPERQ9BY12 RPL31P12-201ENST00000422587 358 ntBASIC4.5□□□□□ -1.69
SCAPERQ9BY12 AL445528.1-201ENST00000426330 420 ntBASIC4.5□□□□□ -1.69
SCAPERQ9BY12 RPL21P112-201ENST00000434403 463 ntBASIC4.5□□□□□ -1.69
SCAPERQ9BY12 HMGB3P11-201ENST00000440127 604 ntBASIC4.5□□□□□ -1.69
SCAPERQ9BY12 AC245517.2-201ENST00000442890 346 ntBASIC4.5□□□□□ -1.69
SCAPERQ9BY12 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.5□□□□□ -1.69
SCAPERQ9BY12 SNORD109B-201ENST00000458961 67 ntBASIC4.5□□□□□ -1.69
SCAPERQ9BY12 SNORD109A-201ENST00000459128 67 ntBASIC4.5□□□□□ -1.69
SCAPERQ9BY12 AC128713.1-201ENST00000471495 306 ntBASIC4.5□□□□□ -1.69
SCAPERQ9BY12 AC111000.2-201ENST00000507775 550 ntBASIC4.5□□□□□ -1.69
SCAPERQ9BY12 SCGB1D5P-201ENST00000515134 247 ntBASIC4.5□□□□□ -1.69
SCAPERQ9BY12 OR5G4P-201ENST00000525251 760 ntBASIC4.5□□□□□ -1.69
SCAPERQ9BY12 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.5□□□□□ -1.69
SCAPERQ9BY12 BNIP3P10-201ENST00000605360 577 ntBASIC4.5□□□□□ -1.69
SCAPERQ9BY12 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.5□□□□□ -1.69
SCAPERQ9BY12 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.5□□□□□ -1.69
SCAPERQ9BY12 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.5□□□□□ -1.69
SCAPERQ9BY12 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SCAPERQ9BY12 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SCAPERQ9BY12 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC4.5□□□□□ -1.69
SCAPERQ9BY12 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.49□□□□□ -1.69
SCAPERQ9BY12 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SCAPERQ9BY12 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SCAPERQ9BY12 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.49□□□□□ -1.69
SCAPERQ9BY12 PWAR6-201ENST00000552334 4618 ntBASIC4.49□□□□□ -1.69
SCAPERQ9BY12 RNU6-984P-201ENST00000363236 109 ntBASIC4.49□□□□□ -1.69
SCAPERQ9BY12 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.49□□□□□ -1.69
SCAPERQ9BY12 AL360182.1-201ENST00000397433 468 ntBASIC4.49□□□□□ -1.69
SCAPERQ9BY12 AC110754.1-201ENST00000399740 601 ntBASIC4.49□□□□□ -1.69
SCAPERQ9BY12 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.49□□□□□ -1.69
SCAPERQ9BY12 TRBV12-1-201ENST00000479785 344 ntBASIC4.49□□□□□ -1.69
SCAPERQ9BY12 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.49□□□□□ -1.69
SCAPERQ9BY12 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SCAPERQ9BY12 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC4.49□□□□□ -1.69
SCAPERQ9BY12 AC011492.1-201ENST00000600023 315 ntBASIC4.49□□□□□ -1.69
SCAPERQ9BY12 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.49□□□□□ -1.69
SCAPERQ9BY12 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SCAPERQ9BY12 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SCAPERQ9BY12 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms