Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SMOQ99835 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.78□□□□□ -1.64
SMOQ99835 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.78□□□□□ -1.64
SMOQ99835 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.78□□□□□ -1.64
SMOQ99835 RPL23AP43-201ENST00000446445 471 ntBASIC4.78□□□□□ -1.64
SMOQ99835 NPM1P49-201ENST00000448027 714 ntBASIC4.78□□□□□ -1.64
SMOQ99835 RPL7L1P1-201ENST00000448259 785 ntBASIC4.78□□□□□ -1.64
SMOQ99835 RPL21P126-201ENST00000470049 478 ntBASIC4.78□□□□□ -1.64
SMOQ99835 AC013356.1-201ENST00000489027 564 ntBASIC4.78□□□□□ -1.64
SMOQ99835 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.78□□□□□ -1.64
SMOQ99835 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SMOQ99835 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.78□□□□□ -1.64
SMOQ99835 RN7SKP96-201ENST00000516948 297 ntBASIC4.78□□□□□ -1.64
SMOQ99835 SOD1P3-201ENST00000518682 454 ntBASIC4.78□□□□□ -1.64
SMOQ99835 RAB9BP1-201ENST00000519581 626 ntBASIC4.78□□□□□ -1.64
SMOQ99835 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.78□□□□□ -1.64
SMOQ99835 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.78□□□□□ -1.64
SMOQ99835 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SMOQ99835 HIGD1AP5-201ENST00000529959 259 ntBASIC4.78□□□□□ -1.64
SMOQ99835 AC016957.1-201ENST00000534895 309 ntBASIC4.78□□□□□ -1.64
SMOQ99835 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SMOQ99835 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SMOQ99835 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.78□□□□□ -1.64
SMOQ99835 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.78□□□□□ -1.64
SMOQ99835 AC091489.2-201ENST00000566263 604 ntBASIC4.78□□□□□ -1.64
SMOQ99835 AC141257.3-201ENST00000572906 215 ntBASIC4.78□□□□□ -1.64
SMOQ99835 RN7SL435P-201ENST00000584418 282 ntBASIC4.78□□□□□ -1.64
SMOQ99835 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.78□□□□□ -1.64
SMOQ99835 AC083760.1-201ENST00000589621 670 ntBASIC4.78□□□□□ -1.64
SMOQ99835 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.78□□□□□ -1.64
SMOQ99835 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.78□□□□□ -1.64
SMOQ99835 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.78□□□□□ -1.64
SMOQ99835 COX6CP4-201ENST00000605798 228 ntBASIC4.78□□□□□ -1.64
SMOQ99835 AC138932.5-201ENST00000617759 563 ntBASIC4.78□□□□□ -1.64
SMOQ99835 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.78□□□□□ -1.64
SMOQ99835 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.78□□□□□ -1.64
SMOQ99835 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SMOQ99835 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SMOQ99835 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SMOQ99835 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SMOQ99835 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.78□□□□□ -1.64
SMOQ99835 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SMOQ99835 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMOQ99835 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMOQ99835 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMOQ99835 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMOQ99835 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
SMOQ99835 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMOQ99835 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.77□□□□□ -1.65
SMOQ99835 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
SMOQ99835 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SMOQ99835 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
SMOQ99835 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
SMOQ99835 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMOQ99835 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.77□□□□□ -1.65
SMOQ99835 RNA5SP447-201ENST00000363749 119 ntBASIC4.77□□□□□ -1.65
SMOQ99835 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
SMOQ99835 VN1R8P-201ENST00000407739 893 ntBASIC4.77□□□□□ -1.65
SMOQ99835 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.77□□□□□ -1.65
SMOQ99835 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMOQ99835 HMGB1P11-201ENST00000413899 637 ntBASIC4.77□□□□□ -1.65
SMOQ99835 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.77□□□□□ -1.65
SMOQ99835 MTCYBP5-201ENST00000423752 1135 ntBASIC4.77□□□□□ -1.65
SMOQ99835 RPS12P10-201ENST00000427031 377 ntBASIC4.77□□□□□ -1.65
SMOQ99835 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.77□□□□□ -1.65
SMOQ99835 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.77□□□□□ -1.65
SMOQ99835 OR2B8P-201ENST00000432841 938 ntBASIC4.77□□□□□ -1.65
SMOQ99835 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.77□□□□□ -1.65
SMOQ99835 MTATP6P13-201ENST00000438531 667 ntBASIC4.77□□□□□ -1.65
SMOQ99835 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.77□□□□□ -1.65
SMOQ99835 MTCO1P48-201ENST00000448024 1096 ntBASIC4.77□□□□□ -1.65
SMOQ99835 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.77□□□□□ -1.65
SMOQ99835 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.77□□□□□ -1.65
SMOQ99835 AC097493.1-201ENST00000463958 372 ntBASIC4.77□□□□□ -1.65
SMOQ99835 AC092757.1-201ENST00000467293 467 ntBASIC4.77□□□□□ -1.65
SMOQ99835 AP000797.1-201ENST00000478870 387 ntBASIC4.77□□□□□ -1.65
SMOQ99835 BNIP3P41-201ENST00000503774 571 ntBASIC4.77□□□□□ -1.65
SMOQ99835 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SMOQ99835 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.77□□□□□ -1.65
SMOQ99835 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.77□□□□□ -1.65
SMOQ99835 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.77□□□□□ -1.65
SMOQ99835 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.77□□□□□ -1.65
SMOQ99835 FABP5P5-201ENST00000515537 406 ntBASIC4.77□□□□□ -1.65
SMOQ99835 RNU6-150P-201ENST00000516237 95 ntBASIC4.77□□□□□ -1.65
SMOQ99835 MTND4LP26-201ENST00000518144 282 ntBASIC4.77□□□□□ -1.65
SMOQ99835 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.77□□□□□ -1.65
SMOQ99835 NPM1P6-201ENST00000521088 871 ntBASIC4.77□□□□□ -1.65
SMOQ99835 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.77□□□□□ -1.65
SMOQ99835 OR5G4P-201ENST00000525251 760 ntBASIC4.77□□□□□ -1.65
SMOQ99835 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.77□□□□□ -1.65
SMOQ99835 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.77□□□□□ -1.65
SMOQ99835 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.77□□□□□ -1.65
SMOQ99835 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.77□□□□□ -1.65
SMOQ99835 SULT1C2P1-202ENST00000562418 459 ntBASIC4.77□□□□□ -1.65
SMOQ99835 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.77□□□□□ -1.65
SMOQ99835 RPL26P30-202ENST00000602923 645 ntBASIC4.77□□□□□ -1.65
SMOQ99835 RBM11P1-201ENST00000604951 799 ntBASIC4.77□□□□□ -1.65
SMOQ99835 AC006566.1-201ENST00000608943 513 ntBASIC4.77□□□□□ -1.65
SMOQ99835 AC027807.2-201ENST00000616099 408 ntBASIC4.77□□□□□ -1.65
SMOQ99835 AP005019.3-201ENST00000620418 560 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms