Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 C1DP4-201ENST00000455429 424 ntBASIC4.56□□□□□ -1.68
CPEB3Q8NE35 RN7SL189P-201ENST00000468631 289 ntBASIC4.56□□□□□ -1.68
CPEB3Q8NE35 COPS8P2-201ENST00000473228 627 ntBASIC4.56□□□□□ -1.68
CPEB3Q8NE35 COX6B1P2-201ENST00000489624 230 ntBASIC4.56□□□□□ -1.68
CPEB3Q8NE35 RPS4XP14-201ENST00000493072 781 ntBASIC4.56□□□□□ -1.68
CPEB3Q8NE35 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 AC097173.1-201ENST00000505862 819 ntBASIC4.56□□□□□ -1.68
CPEB3Q8NE35 AC006390.1-201ENST00000508068 283 ntBASIC4.56□□□□□ -1.68
CPEB3Q8NE35 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 AC006427.1-201ENST00000514359 712 ntBASIC4.56□□□□□ -1.68
CPEB3Q8NE35 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 Y_RNA.693-201ENST00000516641 110 ntBASIC4.56□□□□□ -1.68
CPEB3Q8NE35 RNA5SP34-201ENST00000516887 130 ntBASIC4.56□□□□□ -1.68
CPEB3Q8NE35 RNU6-1003P-201ENST00000517099 105 ntBASIC4.56□□□□□ -1.68
CPEB3Q8NE35 AF186190.1-201ENST00000517470 480 ntBASIC4.56□□□□□ -1.68
CPEB3Q8NE35 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.56□□□□□ -1.68
CPEB3Q8NE35 MTND1P35-201ENST00000526739 508 ntBASIC4.56□□□□□ -1.68
CPEB3Q8NE35 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 AC027369.5-201ENST00000533838 755 ntBASIC4.56□□□□□ -1.68
CPEB3Q8NE35 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 AL157394.1-201ENST00000562983 1224 ntBASIC4.56□□□□□ -1.68
CPEB3Q8NE35 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 NRBF2P1-201ENST00000587407 859 ntBASIC4.56□□□□□ -1.68
CPEB3Q8NE35 TPMTP1-201ENST00000592307 737 ntBASIC4.56□□□□□ -1.68
CPEB3Q8NE35 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 AL121612.2-201ENST00000612261 482 ntBASIC4.56□□□□□ -1.68
CPEB3Q8NE35 AC243654.2-201ENST00000612843 443 ntBASIC4.56□□□□□ -1.68
CPEB3Q8NE35 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 AC010133.1-201ENST00000615809 842 ntBASIC4.56□□□□□ -1.68
CPEB3Q8NE35 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
CPEB3Q8NE35 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CPEB3Q8NE35 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CPEB3Q8NE35 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
CPEB3Q8NE35 AP001642.1-201ENST00000624727 2117 ntBASIC4.55□□□□□ -1.68
CPEB3Q8NE35 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CPEB3Q8NE35 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CPEB3Q8NE35 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CPEB3Q8NE35 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.55□□□□□ -1.68
CPEB3Q8NE35 AC092376.2-201ENST00000622621 4116 ntBASIC4.55□□□□□ -1.68
CPEB3Q8NE35 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CPEB3Q8NE35 ZNF652P1-201ENST00000442420 1309 ntBASIC4.55□□□□□ -1.68
CPEB3Q8NE35 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CPEB3Q8NE35 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CPEB3Q8NE35 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.55□□□□□ -1.68
CPEB3Q8NE35 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CPEB3Q8NE35 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CPEB3Q8NE35 U3.7-201ENST00000363668 216 ntBASIC4.55□□□□□ -1.68
CPEB3Q8NE35 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CPEB3Q8NE35 RNU6-483P-201ENST00000384088 108 ntBASIC4.55□□□□□ -1.68
CPEB3Q8NE35 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CPEB3Q8NE35 AMD1P2-201ENST00000412936 992 ntBASIC4.55□□□□□ -1.68
CPEB3Q8NE35 AC008280.1-201ENST00000418851 412 ntBASIC4.55□□□□□ -1.68
CPEB3Q8NE35 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.55□□□□□ -1.68
CPEB3Q8NE35 AL589872.1-201ENST00000426602 288 ntBASIC4.55□□□□□ -1.68
CPEB3Q8NE35 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.55□□□□□ -1.68
CPEB3Q8NE35 AL161722.2-201ENST00000434731 981 ntBASIC4.55□□□□□ -1.68
CPEB3Q8NE35 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.55□□□□□ -1.68
CPEB3Q8NE35 RPL23AP16-201ENST00000441715 421 ntBASIC4.55□□□□□ -1.68
CPEB3Q8NE35 AP000542.1-201ENST00000448473 371 ntBASIC4.55□□□□□ -1.68
CPEB3Q8NE35 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.55□□□□□ -1.68
CPEB3Q8NE35 AL645937.3-201ENST00000453647 936 ntBASIC4.55□□□□□ -1.68
CPEB3Q8NE35 CBX1P2-201ENST00000453841 458 ntBASIC4.55□□□□□ -1.68
CPEB3Q8NE35 HMGN3P1-201ENST00000453847 193 ntBASIC4.55□□□□□ -1.68
CPEB3Q8NE35 HIGD1AP8-201ENST00000453927 274 ntBASIC4.55□□□□□ -1.68
CPEB3Q8NE35 AC099563.1-201ENST00000456086 418 ntBASIC4.55□□□□□ -1.68
CPEB3Q8NE35 Z92846.1-201ENST00000456203 268 ntBASIC4.55□□□□□ -1.68
CPEB3Q8NE35 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CPEB3Q8NE35 RBM43P1-201ENST00000476891 1081 ntBASIC4.55□□□□□ -1.68
CPEB3Q8NE35 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.55□□□□□ -1.68
CPEB3Q8NE35 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.55□□□□□ -1.68
CPEB3Q8NE35 TMEM251P1-201ENST00000503717 318 ntBASIC4.55□□□□□ -1.68
CPEB3Q8NE35 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.55□□□□□ -1.68
CPEB3Q8NE35 AC016559.2-201ENST00000510759 359 ntBASIC4.55□□□□□ -1.68
CPEB3Q8NE35 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.55□□□□□ -1.68
CPEB3Q8NE35 AC098976.1-201ENST00000513014 541 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms