Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 FCF1P8-201ENST00000510322 597 ntBASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 SYF2P1-201ENST00000550658 413 ntBASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 BX322635.1-201ENST00000605804 496 ntBASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 MIR92B-201ENST00000607575 96 ntBASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 MIR7153-201ENST00000637758 57 ntBASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 DDX6P1-205ENST00000441966 1436 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 AL356274.2-201ENST00000624379 3752 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 RNU4-35P-201ENST00000362588 141 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 SNORD17-201ENST00000390930 237 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 AL590290.1-201ENST00000405336 380 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 RNA5SP107-201ENST00000411358 122 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 RAB9AP3-201ENST00000412737 573 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 SYF2P2-201ENST00000417620 583 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 AC012065.2-201ENST00000421295 375 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 RPL21P23-201ENST00000446654 460 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 AL133547.1-201ENST00000448546 220 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 RAB9AP1-201ENST00000449393 573 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 PTGES3P5-201ENST00000455109 434 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 AC107398.1-201ENST00000486904 505 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 AP002812.1-201ENST00000495378 474 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 AC090071.1-201ENST00000507713 644 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 AC093755.1-201ENST00000512950 1023 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 RNU6-760P-201ENST00000516078 97 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 RNU1-45P-201ENST00000517191 141 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 AP002812.4-201ENST00000532139 286 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 OR8L1P-201ENST00000534005 955 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 AC025260.1-201ENST00000548858 430 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 AC015802.5-201ENST00000607478 399 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 AC009032.1-201ENST00000617574 431 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 SNORD39.4-201ENST00000620099 78 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 AC243312.2-201ENST00000623340 601 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 AC104820.1-201ENST00000624183 307 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 AL034408.1-202ENST00000636088 415 ntBASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDKL3Q8IVW4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 MIR554-201ENST00000384874 96 ntBASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 EI24P1-201ENST00000416584 867 ntBASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 AL389915.1-201ENST00000422463 466 ntBASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 AC018644.1-201ENST00000429934 551 ntBASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 RPL21P112-201ENST00000434403 463 ntBASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 HSPD1P21-201ENST00000436541 245 ntBASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 HMGB1P12-201ENST00000438594 598 ntBASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 RN7SL542P-201ENST00000467147 294 ntBASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 NCOR1P1-202ENST00000486162 291 ntBASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 AC090543.1-201ENST00000492168 485 ntBASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 HMGB1P3-201ENST00000502802 616 ntBASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 APOOP4-201ENST00000513530 597 ntBASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 RN7SKP116-201ENST00000516902 319 ntBASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 AC023632.4-201ENST00000517783 191 ntBASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 TRMT10BP1-201ENST00000519377 943 ntBASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 AC012414.2-201ENST00000559474 187 ntBASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 AC015917.1-201ENST00000579654 510 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms