Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC6.45□□□□□ -1.38
RNF135Q8IUD6 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC6.45□□□□□ -1.38
RNF135Q8IUD6 RNU6-1038P-201ENST00000516516 104 ntBASIC6.45□□□□□ -1.38
RNF135Q8IUD6 RNU7-51P-201ENST00000516560 62 ntBASIC6.45□□□□□ -1.38
RNF135Q8IUD6 HMGB1P41-201ENST00000520234 440 ntBASIC6.45□□□□□ -1.38
RNF135Q8IUD6 AC078899.1-201ENST00000521432 1185 ntBASIC6.45□□□□□ -1.38
RNF135Q8IUD6 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RNF135Q8IUD6 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC6.45□□□□□ -1.38
RNF135Q8IUD6 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC6.45□□□□□ -1.38
RNF135Q8IUD6 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.45□□□□□ -1.38
RNF135Q8IUD6 MIR4301-201ENST00000577203 66 ntBASIC6.45□□□□□ -1.38
RNF135Q8IUD6 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.45□□□□□ -1.38
RNF135Q8IUD6 FO393422.1-201ENST00000603908 708 ntBASIC6.45□□□□□ -1.38
RNF135Q8IUD6 AC007938.3-201ENST00000604965 623 ntBASIC6.45□□□□□ -1.38
RNF135Q8IUD6 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.45□□□□□ -1.38
RNF135Q8IUD6 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.45□□□□□ -1.38
RNF135Q8IUD6 uc_338.34-201ENST00000617467 174 ntBASIC6.45□□□□□ -1.38
RNF135Q8IUD6 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC6.45□□□□□ -1.38
RNF135Q8IUD6 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.45□□□□□ -1.38
RNF135Q8IUD6 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RNF135Q8IUD6 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.45□□□□□ -1.38
RNF135Q8IUD6 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RNF135Q8IUD6 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
RNF135Q8IUD6 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RNF135Q8IUD6 AC005225.5-201ENST00000623547 2225 ntBASIC6.45□□□□□ -1.38
RNF135Q8IUD6 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
RNF135Q8IUD6 BIN2P1-201ENST00000504996 1530 ntBASIC6.45□□□□□ -1.38
RNF135Q8IUD6 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 AC027088.4-201ENST00000611559 1947 ntBASIC6.44□□□□□ -1.38
RNF135Q8IUD6 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 AL138713.1-201ENST00000624026 2130 ntBASIC6.44□□□□□ -1.38
RNF135Q8IUD6 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 AC092013.1-201ENST00000438795 332 ntBASIC6.44□□□□□ -1.38
RNF135Q8IUD6 HMGB3P22-202ENST00000451823 572 ntBASIC6.44□□□□□ -1.38
RNF135Q8IUD6 SNRPFP3-201ENST00000457792 225 ntBASIC6.44□□□□□ -1.38
RNF135Q8IUD6 MTATP8P1-201ENST00000467115 207 ntBASIC6.44□□□□□ -1.38
RNF135Q8IUD6 SIAH1P1-201ENST00000479411 923 ntBASIC6.44□□□□□ -1.38
RNF135Q8IUD6 RN7SL826P-201ENST00000479724 288 ntBASIC6.44□□□□□ -1.38
RNF135Q8IUD6 AC024558.1-201ENST00000505008 528 ntBASIC6.44□□□□□ -1.38
RNF135Q8IUD6 IGKV1D-22-201ENST00000518953 324 ntBASIC6.44□□□□□ -1.38
RNF135Q8IUD6 MTND4P7-201ENST00000523876 130 ntBASIC6.44□□□□□ -1.38
RNF135Q8IUD6 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 MDM2-233ENST00000545204 398 ntTSL 5 BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 AP000654.2-201ENST00000605633 586 ntBASIC6.44□□□□□ -1.38
RNF135Q8IUD6 AC005014.2-201ENST00000607795 599 ntBASIC6.44□□□□□ -1.38
RNF135Q8IUD6 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 AL731532.1-201ENST00000623972 4236 ntBASIC6.44□□□□□ -1.38
RNF135Q8IUD6 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 AC140479.2-201ENST00000421567 3130 ntBASIC6.44□□□□□ -1.38
RNF135Q8IUD6 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF135Q8IUD6 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF135Q8IUD6 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RNF135Q8IUD6 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RNF135Q8IUD6 AC244517.1-201ENST00000606030 2086 ntBASIC6.43□□□□□ -1.38
RNF135Q8IUD6 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RNF135Q8IUD6 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.43□□□□□ -1.38
RNF135Q8IUD6 MIR375-201ENST00000362103 64 ntBASIC6.43□□□□□ -1.38
RNF135Q8IUD6 Y_RNA.378-201ENST00000365652 113 ntBASIC6.43□□□□□ -1.38
RNF135Q8IUD6 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF135Q8IUD6 PARD3-204ENST00000374768 799 ntTSL 3 BASIC6.43□□□□□ -1.38
RNF135Q8IUD6 RN7SKP106-201ENST00000410832 272 ntBASIC6.43□□□□□ -1.38
RNF135Q8IUD6 BX323014.1-201ENST00000412876 237 ntBASIC6.43□□□□□ -1.38
RNF135Q8IUD6 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RNF135Q8IUD6 AL354890.1-201ENST00000413730 346 ntBASIC6.43□□□□□ -1.38
RNF135Q8IUD6 MTCYBP10-201ENST00000424905 650 ntBASIC6.43□□□□□ -1.38
RNF135Q8IUD6 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.43□□□□□ -1.38
RNF135Q8IUD6 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.43□□□□□ -1.38
RNF135Q8IUD6 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC6.43□□□□□ -1.38
RNF135Q8IUD6 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF135Q8IUD6 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms