Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.24□□□□□ -1.41
FOXR1Q6PIV2 AC023157.2-201ENST00000540596 141 ntBASIC6.24□□□□□ -1.41
FOXR1Q6PIV2 OR8R1P-201ENST00000543943 764 ntBASIC6.24□□□□□ -1.41
FOXR1Q6PIV2 RRN3P3-201ENST00000549207 578 ntBASIC6.24□□□□□ -1.41
FOXR1Q6PIV2 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.24□□□□□ -1.41
FOXR1Q6PIV2 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.24□□□□□ -1.41
FOXR1Q6PIV2 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
FOXR1Q6PIV2 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC6.24□□□□□ -1.41
FOXR1Q6PIV2 AC007448.1-201ENST00000582714 234 ntBASIC6.24□□□□□ -1.41
FOXR1Q6PIV2 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.24□□□□□ -1.41
FOXR1Q6PIV2 AL121992.2-201ENST00000606262 256 ntBASIC6.24□□□□□ -1.41
FOXR1Q6PIV2 AL096712.1-201ENST00000614561 159 ntBASIC6.24□□□□□ -1.41
FOXR1Q6PIV2 MIR6085-201ENST00000618314 110 ntBASIC6.24□□□□□ -1.41
FOXR1Q6PIV2 AC098657.3-201ENST00000620434 263 ntBASIC6.24□□□□□ -1.41
FOXR1Q6PIV2 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
FOXR1Q6PIV2 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
FOXR1Q6PIV2 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
FOXR1Q6PIV2 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
FOXR1Q6PIV2 AC004656.1-201ENST00000568479 4951 ntBASIC6.24□□□□□ -1.41
FOXR1Q6PIV2 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
FOXR1Q6PIV2 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.24□□□□□ -1.41
FOXR1Q6PIV2 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
FOXR1Q6PIV2 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
FOXR1Q6PIV2 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
FOXR1Q6PIV2 AC011933.2-201ENST00000578539 2790 ntBASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 RNU6-874P-201ENST00000362390 105 ntBASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 RNU6-552P-201ENST00000362869 119 ntBASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 RNU6-770P-201ENST00000363929 105 ntBASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 RNU4-2-201ENST00000365668 141 ntBASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 Y_RNA.389-201ENST00000383924 113 ntBASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 RNU6-472P-201ENST00000384299 107 ntBASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 RNU6-601P-201ENST00000384540 107 ntBASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 RPL7P60-201ENST00000397636 735 ntBASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 VDAC1P9-201ENST00000412766 841 ntBASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 RPS3P2-201ENST00000421346 701 ntBASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 AC092832.1-201ENST00000422934 400 ntBASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 AL450996.1-201ENST00000445574 1202 ntBASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 RPS23P9-201ENST00000448848 438 ntBASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 AC022206.1-201ENST00000495947 347 ntBASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 HMGN1P9-201ENST00000515212 298 ntBASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 MIR5186-201ENST00000577504 120 ntBASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 MIR3128-201ENST00000581957 66 ntBASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 AC027229.1-201ENST00000583887 253 ntBASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 AC098479.1-201ENST00000609225 154 ntBASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 AC133104.2-201ENST00000615272 193 ntBASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 AC141273.2-201ENST00000618989 130 ntBASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 RNF6P1-201ENST00000444889 1784 ntBASIC6.23□□□□□ -1.41
FOXR1Q6PIV2 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXR1Q6PIV2 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXR1Q6PIV2 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FOXR1Q6PIV2 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXR1Q6PIV2 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
FOXR1Q6PIV2 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXR1Q6PIV2 AL158163.1-201ENST00000603915 1649 ntBASIC6.22□□□□□ -1.41
FOXR1Q6PIV2 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.22□□□□□ -1.41
FOXR1Q6PIV2 AC093311.1-201ENST00000506586 2021 ntBASIC6.22□□□□□ -1.41
FOXR1Q6PIV2 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.22□□□□□ -1.41
FOXR1Q6PIV2 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.22□□□□□ -1.41
FOXR1Q6PIV2 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXR1Q6PIV2 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
FOXR1Q6PIV2 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXR1Q6PIV2 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXR1Q6PIV2 RNU6-39P-201ENST00000384344 107 ntBASIC6.22□□□□□ -1.41
FOXR1Q6PIV2 RNA5SP187-201ENST00000384400 119 ntBASIC6.22□□□□□ -1.41
FOXR1Q6PIV2 MIR433-201ENST00000384837 93 ntBASIC6.22□□□□□ -1.41
FOXR1Q6PIV2 RN7SKP121-201ENST00000410842 305 ntBASIC6.22□□□□□ -1.41
FOXR1Q6PIV2 AL596448.1-201ENST00000415024 392 ntBASIC6.22□□□□□ -1.41
FOXR1Q6PIV2 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC6.22□□□□□ -1.41
FOXR1Q6PIV2 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXR1Q6PIV2 AC083862.1-201ENST00000427378 1242 ntBASIC6.22□□□□□ -1.41
FOXR1Q6PIV2 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.22□□□□□ -1.41
FOXR1Q6PIV2 AC138761.5-201ENST00000433967 325 ntBASIC6.22□□□□□ -1.41
FOXR1Q6PIV2 MTND5P15-201ENST00000434246 349 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms