Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RPL39P5-202ENST00000512505 151 ntBASIC7.05□□□□□ -1.28
RC3H1Q5TC82 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC7.05□□□□□ -1.28
RC3H1Q5TC82 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC7.05□□□□□ -1.28
RC3H1Q5TC82 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC7.05□□□□□ -1.28
RC3H1Q5TC82 MIR3118-1-201ENST00000581787 76 ntBASIC7.05□□□□□ -1.28
RC3H1Q5TC82 MIR548Y-201ENST00000582739 110 ntBASIC7.05□□□□□ -1.28
RC3H1Q5TC82 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
RC3H1Q5TC82 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RC3H1Q5TC82 AC130324.3-201ENST00000614165 542 ntBASIC7.05□□□□□ -1.28
RC3H1Q5TC82 AC007485.1-201ENST00000616755 206 ntBASIC7.05□□□□□ -1.28
RC3H1Q5TC82 AC009237.17-201ENST00000618111 748 ntBASIC7.05□□□□□ -1.28
RC3H1Q5TC82 AC074101.1-201ENST00000637861 241 ntBASIC7.05□□□□□ -1.28
RC3H1Q5TC82 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
RC3H1Q5TC82 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
RC3H1Q5TC82 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
RC3H1Q5TC82 VPS35P1-201ENST00000563400 1518 ntBASIC7.05□□□□□ -1.28
RC3H1Q5TC82 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.05□□□□□ -1.28
RC3H1Q5TC82 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RC3H1Q5TC82 AC090017.1-201ENST00000548612 1779 ntBASIC7.05□□□□□ -1.28
RC3H1Q5TC82 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RC3H1Q5TC82 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 MFF-206ENST00000392059 1710 ntTSL 5 BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 PABPC1P8-201ENST00000452851 2086 ntBASIC7.04□□□□□ -1.28
RC3H1Q5TC82 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 AC112243.1-201ENST00000623949 3851 ntBASIC7.04□□□□□ -1.28
RC3H1Q5TC82 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 RNU6-1115P-201ENST00000362490 106 ntBASIC7.04□□□□□ -1.28
RC3H1Q5TC82 Y_RNA.153-201ENST00000363615 91 ntBASIC7.04□□□□□ -1.28
RC3H1Q5TC82 RN7SKP103-201ENST00000363848 320 ntBASIC7.04□□□□□ -1.28
RC3H1Q5TC82 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 Y_RNA.414-201ENST00000384011 101 ntBASIC7.04□□□□□ -1.28
RC3H1Q5TC82 RNU6-606P-201ENST00000384721 111 ntBASIC7.04□□□□□ -1.28
RC3H1Q5TC82 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 AL133388.1-201ENST00000404509 287 ntBASIC7.04□□□□□ -1.28
RC3H1Q5TC82 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 RNA5SP498-201ENST00000411342 120 ntBASIC7.04□□□□□ -1.28
RC3H1Q5TC82 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 AC093162.1-201ENST00000419682 124 ntBASIC7.04□□□□□ -1.28
RC3H1Q5TC82 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 HNRNPA3P4-201ENST00000427514 803 ntBASIC7.04□□□□□ -1.28
RC3H1Q5TC82 RPS3AP38-201ENST00000435889 763 ntBASIC7.04□□□□□ -1.28
RC3H1Q5TC82 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 AL392103.1-201ENST00000447000 198 ntBASIC7.04□□□□□ -1.28
RC3H1Q5TC82 RPL7P52-201ENST00000449200 742 ntBASIC7.04□□□□□ -1.28
RC3H1Q5TC82 RPL12P20-201ENST00000475538 479 ntBASIC7.04□□□□□ -1.28
RC3H1Q5TC82 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 TOMM22P4-201ENST00000511318 336 ntBASIC7.04□□□□□ -1.28
RC3H1Q5TC82 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 HMGN2P47-201ENST00000559378 272 ntBASIC7.04□□□□□ -1.28
RC3H1Q5TC82 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 MIR4433B-201ENST00000581329 102 ntBASIC7.04□□□□□ -1.28
RC3H1Q5TC82 FAM106CP-201ENST00000582212 507 ntBASIC7.04□□□□□ -1.28
RC3H1Q5TC82 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 AC133104.2-201ENST00000615272 193 ntBASIC7.04□□□□□ -1.28
RC3H1Q5TC82 AC023509.5-201ENST00000617434 807 ntBASIC7.04□□□□□ -1.28
RC3H1Q5TC82 AP000550.3-201ENST00000637734 379 ntBASIC7.04□□□□□ -1.28
RC3H1Q5TC82 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 OR55B1P-203ENST00000641518 2602 ntBASIC7.04□□□□□ -1.28
RC3H1Q5TC82 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RC3H1Q5TC82 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 DPY19L2P2-203ENST00000435536 1858 ntBASIC7.03□□□□□ -1.28
RC3H1Q5TC82 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 Y_RNA.447-201ENST00000384184 113 ntBASIC7.03□□□□□ -1.28
RC3H1Q5TC82 Y_RNA.455-201ENST00000384230 98 ntBASIC7.03□□□□□ -1.28
RC3H1Q5TC82 RNU6-33P-201ENST00000384793 107 ntBASIC7.03□□□□□ -1.28
RC3H1Q5TC82 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 RNF10P1-201ENST00000418589 369 ntBASIC7.03□□□□□ -1.28
RC3H1Q5TC82 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 AC079781.2-201ENST00000446424 169 ntBASIC7.03□□□□□ -1.28
RC3H1Q5TC82 CBX1P2-201ENST00000453841 458 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms