Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 RNU6-661P-201ENST00000362409 107 ntBASIC1.74□□□□□ -2.13
UBR4Q5T4S7 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 RNU4-53P-201ENST00000410828 140 ntBASIC1.74□□□□□ -2.13
UBR4Q5T4S7 AC006517.1-201ENST00000480485 328 ntBASIC1.74□□□□□ -2.13
UBR4Q5T4S7 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 CYP4A43P-201ENST00000568156 121 ntBASIC1.74□□□□□ -2.13
UBR4Q5T4S7 AC024153.1-201ENST00000603103 365 ntBASIC1.74□□□□□ -2.13
UBR4Q5T4S7 OSBPL9P4-201ENST00000371707 1800 ntBASIC1.74□□□□□ -2.13
UBR4Q5T4S7 AC008725.1-201ENST00000605123 2263 ntBASIC1.74□□□□□ -2.13
UBR4Q5T4S7 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 MIR592-201ENST00000384959 97 ntBASIC1.74□□□□□ -2.13
UBR4Q5T4S7 CYCSP49-201ENST00000420810 319 ntBASIC1.74□□□□□ -2.13
UBR4Q5T4S7 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 AC108751.2-201ENST00000469993 231 ntBASIC1.74□□□□□ -2.13
UBR4Q5T4S7 TRBV12-2-201ENST00000489763 344 ntBASIC1.74□□□□□ -2.13
UBR4Q5T4S7 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 SARNP-203ENST00000552080 726 ntTSL 2 BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
UBR4Q5T4S7 BCLAF1P2-201ENST00000624956 2609 ntBASIC1.74□□□□□ -2.13
UBR4Q5T4S7 CD2-201ENST00000369477 478 ntTSL 2 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 RSL24D1P1-201ENST00000404972 493 ntBASIC1.73□□□□□ -2.13
UBR4Q5T4S7 NPM1P24-201ENST00000428039 894 ntBASIC1.73□□□□□ -2.13
UBR4Q5T4S7 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 RPS4XP11-201ENST00000446897 772 ntBASIC1.73□□□□□ -2.13
UBR4Q5T4S7 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 DMD-205ENST00000359836 7339 ntTSL 5 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 RNU6-35P-201ENST00000384530 107 ntBASIC1.73□□□□□ -2.13
UBR4Q5T4S7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 OR5H5P-201ENST00000503164 928 ntBASIC1.73□□□□□ -2.13
UBR4Q5T4S7 NPM1P5-201ENST00000557228 838 ntBASIC1.73□□□□□ -2.13
UBR4Q5T4S7 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 MAPK10-362ENST00000641864 4484 ntBASIC1.73□□□□□ -2.13
UBR4Q5T4S7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 RNA5SP148-201ENST00000516527 94 ntBASIC1.73□□□□□ -2.13
UBR4Q5T4S7 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 BCORP1-203ENST00000513194 5093 ntBASIC1.73□□□□□ -2.13
UBR4Q5T4S7 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 SNRPGP5-201ENST00000456003 220 ntBASIC1.73□□□□□ -2.13
UBR4Q5T4S7 RPL31P13-201ENST00000484151 370 ntBASIC1.73□□□□□ -2.13
UBR4Q5T4S7 MTND3P6-201ENST00000485242 339 ntBASIC1.73□□□□□ -2.13
UBR4Q5T4S7 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC1.73□□□□□ -2.13
UBR4Q5T4S7 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 DNAJC19P1-201ENST00000455312 319 ntBASIC1.72□□□□□ -2.13
UBR4Q5T4S7 RPL31P61-201ENST00000496160 376 ntBASIC1.72□□□□□ -2.13
UBR4Q5T4S7 C1GALT1P1-201ENST00000548895 1089 ntBASIC1.72□□□□□ -2.13
UBR4Q5T4S7 AL022099.1-201ENST00000604551 712 ntBASIC1.72□□□□□ -2.13
UBR4Q5T4S7 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
UBR4Q5T4S7 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms