Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AL590240.1-201ENST00000334118 313 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 RNU6-757P-201ENST00000410334 100 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 RNU2-21P-201ENST00000410368 188 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AL139421.1-201ENST00000423010 169 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 IFNNP1-201ENST00000429219 553 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 RPL23AP25-201ENST00000430973 463 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 USP9YP31-201ENST00000431405 881 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 MTCO2P20-201ENST00000437339 673 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 MTCYBP31-201ENST00000438855 1122 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AL034418.1-201ENST00000448675 860 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 RPS20P32-201ENST00000456044 356 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AC013828.1-201ENST00000481845 158 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 MTCYBP16-201ENST00000509187 1129 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AC023141.12-201ENST00000512399 199 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 RNU5A-4P-201ENST00000516588 111 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 RNU1-45P-201ENST00000517191 141 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 UBTFL10-201ENST00000528532 562 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AC100770.1-201ENST00000532310 322 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AP000619.3-201ENST00000535634 1127 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AC090502.2-201ENST00000549267 280 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 NBEAP1-201ENST00000554452 979 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AC074051.3-201ENST00000570238 358 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AL354943.1-201ENST00000572103 781 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AC091178.1-203ENST00000584586 279 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AC006539.2-201ENST00000601729 572 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AL390838.2-201ENST00000602394 274 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AC005332.6-201ENST00000613178 446 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AC023158.2-201ENST00000614876 543 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AC244100.1-202ENST00000621554 382 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 AC073348.1-201ENST00000623002 331 ntBASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
PDLIM3Q53GG5 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 NCLP2-201ENST00000416078 1462 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 AC107982.1-201ENST00000507171 1300 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 AL121657.1-201ENST00000327215 531 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 RNU6-441P-201ENST00000384545 106 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 PTMAP2-201ENST00000397627 327 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 RNU2-28P-201ENST00000410457 189 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 AC073264.1-201ENST00000411508 416 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 AC069218.2-201ENST00000411665 344 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 VPS26BP1-201ENST00000417155 755 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 RPL23AP33-201ENST00000442301 452 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 EXTL2P1-201ENST00000446218 416 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 HMGN2P21-201ENST00000447764 270 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 BX276092.4-201ENST00000452056 248 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 AL133477.1-201ENST00000457472 514 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 RPL7P19-201ENST00000469948 618 ntBASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.73□□□□□ -1.81
PDLIM3Q53GG5 RPS26P28-201ENST00000470806 348 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms