Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RPL23AP25-201ENST00000430973 463 ntBASIC4.65□□□□□ -1.67
CCDC38Q502W7 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC38Q502W7 AC016831.4-201ENST00000438302 307 ntBASIC4.65□□□□□ -1.67
CCDC38Q502W7 MTCYBP3-201ENST00000445588 1137 ntBASIC4.65□□□□□ -1.67
CCDC38Q502W7 AL606662.1-201ENST00000445763 553 ntBASIC4.65□□□□□ -1.67
CCDC38Q502W7 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC38Q502W7 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC38Q502W7 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC38Q502W7 IGLV2-34-201ENST00000490007 283 ntBASIC4.65□□□□□ -1.67
CCDC38Q502W7 AC008897.1-201ENST00000494006 347 ntBASIC4.65□□□□□ -1.67
CCDC38Q502W7 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC38Q502W7 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC38Q502W7 TMEM251P1-201ENST00000503717 318 ntBASIC4.65□□□□□ -1.67
CCDC38Q502W7 AC108145.1-201ENST00000503770 153 ntBASIC4.65□□□□□ -1.67
CCDC38Q502W7 AC139783.2-201ENST00000504847 1145 ntBASIC4.65□□□□□ -1.67
CCDC38Q502W7 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.65□□□□□ -1.67
CCDC38Q502W7 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC38Q502W7 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC38Q502W7 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC38Q502W7 OR5D15P-201ENST00000531671 942 ntBASIC4.65□□□□□ -1.67
CCDC38Q502W7 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.65□□□□□ -1.67
CCDC38Q502W7 AL110118.1-201ENST00000553543 400 ntBASIC4.65□□□□□ -1.67
CCDC38Q502W7 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC38Q502W7 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC38Q502W7 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC38Q502W7 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.65□□□□□ -1.67
CCDC38Q502W7 MAGOH2P-202ENST00000584384 429 ntBASIC4.65□□□□□ -1.67
CCDC38Q502W7 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC38Q502W7 AC006539.2-201ENST00000601729 572 ntBASIC4.65□□□□□ -1.67
CCDC38Q502W7 AC103792.1-201ENST00000603591 919 ntBASIC4.65□□□□□ -1.67
CCDC38Q502W7 AC025811.1-201ENST00000604312 472 ntBASIC4.65□□□□□ -1.67
CCDC38Q502W7 AP002360.3-201ENST00000607673 710 ntBASIC4.65□□□□□ -1.67
CCDC38Q502W7 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC38Q502W7 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC38Q502W7 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC38Q502W7 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC38Q502W7 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC38Q502W7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC38Q502W7 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC38Q502W7 AP000526.1-201ENST00000603308 1388 ntBASIC4.65□□□□□ -1.67
CCDC38Q502W7 OR4G11P-202ENST00000642116 1414 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC38Q502W7 NUP58P1-201ENST00000502546 1738 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CCDC38Q502W7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC38Q502W7 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC38Q502W7 RNA5SP22-201ENST00000365393 109 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 RNU1-44P-201ENST00000384453 163 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC38Q502W7 AL356131.1-201ENST00000405826 414 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC38Q502W7 VN1R8P-201ENST00000407739 893 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC38Q502W7 BX510359.2-201ENST00000417920 305 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC38Q502W7 AL022400.1-201ENST00000423946 935 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.64□□□□□ -1.67
CCDC38Q502W7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC38Q502W7 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC38Q502W7 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC38Q502W7 AC104763.1-201ENST00000475274 360 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 LINC00888-204ENST00000487386 421 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 RPS3AP22-201ENST00000488297 769 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 AC090453.1-201ENST00000495560 436 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 PRELID3BP7-201ENST00000503606 469 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC38Q502W7 ATP1B1P1-201ENST00000509767 915 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 RN7SKP116-201ENST00000516902 319 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC38Q502W7 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC38Q502W7 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC38Q502W7 AC107016.1-201ENST00000550463 337 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.64□□□□□ -1.67
CCDC38Q502W7 UBE2FP2-201ENST00000566646 462 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC38Q502W7 MIR4737-201ENST00000583979 81 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 ELOCP28-201ENST00000590044 317 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 AC104785.1-201ENST00000603220 588 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 AC018638.7-201ENST00000605836 1114 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 AL360219.1-201ENST00000610230 366 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC38Q502W7 U73479.1-201ENST00000618062 168 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 AL607023.1-201ENST00000620045 248 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC38Q502W7 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.64□□□□□ -1.67
CCDC38Q502W7 AC103706.2-201ENST00000638080 240 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC38Q502W7 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC38Q502W7 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC38Q502W7 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CCDC38Q502W7 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC38Q502W7 DDX43P2-201ENST00000604753 1354 ntBASIC4.64□□□□□ -1.67
CCDC38Q502W7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC38Q502W7 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC38Q502W7 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC38Q502W7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC38Q502W7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
CCDC38Q502W7 AL391994.1-201ENST00000254724 282 ntBASIC4.63□□□□□ -1.67
CCDC38Q502W7 RNU6-1200P-201ENST00000384162 107 ntBASIC4.63□□□□□ -1.67
CCDC38Q502W7 RPL31P1-201ENST00000398116 372 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms