Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 XKRYP6-201ENST00000440468 1116 ntBASIC2.89□□□□□ -1.95
CCDC58Q4VC31 ATP5C1P1-201ENST00000441945 895 ntBASIC2.89□□□□□ -1.95
CCDC58Q4VC31 XKRYP3-201ENST00000442113 1116 ntBASIC2.89□□□□□ -1.95
CCDC58Q4VC31 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 RBMY2UP-201ENST00000453474 324 ntBASIC2.89□□□□□ -1.95
CCDC58Q4VC31 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 AL136126.1-201ENST00000473603 402 ntBASIC2.89□□□□□ -1.95
CCDC58Q4VC31 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 AC093755.1-201ENST00000512950 1023 ntBASIC2.89□□□□□ -1.95
CCDC58Q4VC31 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 IGKV2D-10-201ENST00000520194 281 ntBASIC2.89□□□□□ -1.95
CCDC58Q4VC31 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 CENPUP2-201ENST00000555897 1186 ntBASIC2.89□□□□□ -1.95
CCDC58Q4VC31 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 AC245128.3-201ENST00000594721 748 ntBASIC2.89□□□□□ -1.95
CCDC58Q4VC31 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 AC091057.2-201ENST00000602594 792 ntBASIC2.89□□□□□ -1.95
CCDC58Q4VC31 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 AC113368.1-201ENST00000603736 382 ntBASIC2.89□□□□□ -1.95
CCDC58Q4VC31 AC015802.5-201ENST00000607478 399 ntBASIC2.89□□□□□ -1.95
CCDC58Q4VC31 AC107871.2-201ENST00000612894 502 ntBASIC2.89□□□□□ -1.95
CCDC58Q4VC31 AL356490.1-201ENST00000623079 479 ntBASIC2.89□□□□□ -1.95
CCDC58Q4VC31 AC091903.1-201ENST00000624322 454 ntBASIC2.89□□□□□ -1.95
CCDC58Q4VC31 AC127502.3-201ENST00000636170 1206 ntBASIC2.89□□□□□ -1.95
CCDC58Q4VC31 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC58Q4VC31 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC58Q4VC31 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC58Q4VC31 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC58Q4VC31 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC58Q4VC31 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CCDC58Q4VC31 MTND5P24-201ENST00000438892 1767 ntBASIC2.88□□□□□ -1.95
CCDC58Q4VC31 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC58Q4VC31 METTL21EP-201ENST00000298105 713 ntBASIC2.88□□□□□ -1.95
CCDC58Q4VC31 SNORA46-201ENST00000384762 135 ntBASIC2.88□□□□□ -1.95
CCDC58Q4VC31 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC2.88□□□□□ -1.95
CCDC58Q4VC31 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC58Q4VC31 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC58Q4VC31 RPS29P7-201ENST00000439662 171 ntBASIC2.88□□□□□ -1.95
CCDC58Q4VC31 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC58Q4VC31 UQCRHP3-201ENST00000451503 251 ntBASIC2.88□□□□□ -1.95
CCDC58Q4VC31 PLGLA-201ENST00000465668 449 ntBASIC2.88□□□□□ -1.95
CCDC58Q4VC31 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC58Q4VC31 NDUFA5P9-201ENST00000472609 340 ntBASIC2.88□□□□□ -1.95
CCDC58Q4VC31 HPRT1P1-201ENST00000509498 657 ntBASIC2.88□□□□□ -1.95
CCDC58Q4VC31 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC58Q4VC31 NPM1P41-201ENST00000512920 831 ntBASIC2.88□□□□□ -1.95
CCDC58Q4VC31 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC58Q4VC31 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC58Q4VC31 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.88□□□□□ -1.95
CCDC58Q4VC31 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC58Q4VC31 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
CCDC58Q4VC31 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC58Q4VC31 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC58Q4VC31 AC005476.1-201ENST00000554427 397 ntBASIC2.88□□□□□ -1.95
CCDC58Q4VC31 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC58Q4VC31 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC58Q4VC31 RPL23AP88-201ENST00000605759 454 ntBASIC2.88□□□□□ -1.95
CCDC58Q4VC31 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC58Q4VC31 AC006378.2-201ENST00000623178 2476 ntBASIC2.88□□□□□ -1.95
CCDC58Q4VC31 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CCDC58Q4VC31 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC58Q4VC31 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC58Q4VC31 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC58Q4VC31 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC58Q4VC31 RPL32P3-201ENST00000359025 275 ntBASIC2.87□□□□□ -1.95
CCDC58Q4VC31 RNA5SP119-201ENST00000362715 117 ntBASIC2.87□□□□□ -1.95
CCDC58Q4VC31 MIR320B1-201ENST00000390209 79 ntBASIC2.87□□□□□ -1.95
CCDC58Q4VC31 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC58Q4VC31 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC58Q4VC31 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CCDC58Q4VC31 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC58Q4VC31 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC58Q4VC31 ATP5JP1-201ENST00000431631 322 ntBASIC2.87□□□□□ -1.95
CCDC58Q4VC31 AL035458.1-201ENST00000433096 585 ntBASIC2.87□□□□□ -1.95
CCDC58Q4VC31 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC58Q4VC31 HMGB3P6-201ENST00000444896 598 ntBASIC2.87□□□□□ -1.95
CCDC58Q4VC31 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC58Q4VC31 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC58Q4VC31 IGKV2-26-201ENST00000518305 343 ntBASIC2.87□□□□□ -1.95
CCDC58Q4VC31 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC58Q4VC31 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC2.87□□□□□ -1.95
CCDC58Q4VC31 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC58Q4VC31 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC58Q4VC31 AC007224.1-201ENST00000564410 144 ntBASIC2.87□□□□□ -1.95
CCDC58Q4VC31 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC58Q4VC31 BDH2P1-201ENST00000602288 736 ntBASIC2.87□□□□□ -1.95
CCDC58Q4VC31 AC084373.1-201ENST00000603311 235 ntBASIC2.87□□□□□ -1.95
CCDC58Q4VC31 AC005972.3-201ENST00000606304 481 ntBASIC2.87□□□□□ -1.95
CCDC58Q4VC31 AL157817.1-201ENST00000614264 790 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms