Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AL354760.1-201ENST00000608357 643 ntBASIC3.66□□□□□ -1.82
CBX1P83916 VN1R9P-201ENST00000614184 867 ntBASIC3.66□□□□□ -1.82
CBX1P83916 AC107308.1-201ENST00000615897 301 ntBASIC3.66□□□□□ -1.82
CBX1P83916 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CBX1P83916 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.66□□□□□ -1.82
CBX1P83916 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CBX1P83916 AC012618.3-205ENST00000637896 1496 ntBASIC3.66□□□□□ -1.82
CBX1P83916 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CBX1P83916 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CBX1P83916 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
CBX1P83916 AL132640.2-201ENST00000559968 1698 ntBASIC3.65□□□□□ -1.82
CBX1P83916 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CBX1P83916 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.65□□□□□ -1.82
CBX1P83916 AL157700.1-201ENST00000561973 1432 ntBASIC3.65□□□□□ -1.83
CBX1P83916 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CBX1P83916 SNORA51.4-201ENST00000364993 124 ntBASIC3.65□□□□□ -1.83
CBX1P83916 RNU6-481P-201ENST00000384194 107 ntBASIC3.65□□□□□ -1.83
CBX1P83916 MIR129-1-201ENST00000384972 72 ntBASIC3.65□□□□□ -1.83
CBX1P83916 RNU4-25P-201ENST00000410569 230 ntBASIC3.65□□□□□ -1.83
CBX1P83916 RN7SKP58-201ENST00000411010 305 ntBASIC3.65□□□□□ -1.83
CBX1P83916 AL356968.1-201ENST00000416622 474 ntBASIC3.65□□□□□ -1.83
CBX1P83916 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.65□□□□□ -1.83
CBX1P83916 DPPA2P1-201ENST00000428060 556 ntBASIC3.65□□□□□ -1.83
CBX1P83916 AC068287.1-201ENST00000430283 295 ntBASIC3.65□□□□□ -1.83
CBX1P83916 RPS3AP54-201ENST00000435535 734 ntBASIC3.65□□□□□ -1.83
CBX1P83916 TBCAP1-201ENST00000436520 327 ntBASIC3.65□□□□□ -1.83
CBX1P83916 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.65□□□□□ -1.83
CBX1P83916 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.65□□□□□ -1.83
CBX1P83916 AL929288.2-201ENST00000446368 407 ntBASIC3.65□□□□□ -1.83
CBX1P83916 NPM1P49-201ENST00000448027 714 ntBASIC3.65□□□□□ -1.83
CBX1P83916 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.65□□□□□ -1.83
CBX1P83916 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.65□□□□□ -1.83
CBX1P83916 Z95152.1-201ENST00000453556 656 ntBASIC3.65□□□□□ -1.83
CBX1P83916 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.65□□□□□ -1.83
CBX1P83916 RPS15AP1-201ENST00000457423 391 ntBASIC3.65□□□□□ -1.83
CBX1P83916 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.65□□□□□ -1.83
CBX1P83916 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.65□□□□□ -1.83
CBX1P83916 AC092451.1-201ENST00000480211 153 ntBASIC3.65□□□□□ -1.83
CBX1P83916 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.65□□□□□ -1.83
CBX1P83916 SCARNA20.6-201ENST00000517251 106 ntBASIC3.65□□□□□ -1.83
CBX1P83916 HIGD1AP6-201ENST00000521833 279 ntBASIC3.65□□□□□ -1.83
CBX1P83916 MTCO1P49-201ENST00000523429 802 ntBASIC3.65□□□□□ -1.83
CBX1P83916 OR4R3P-201ENST00000525084 838 ntBASIC3.65□□□□□ -1.83
CBX1P83916 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.65□□□□□ -1.83
CBX1P83916 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.65□□□□□ -1.83
CBX1P83916 AC090616.5-202ENST00000582111 297 ntBASIC3.65□□□□□ -1.83
CBX1P83916 AL627309.6-201ENST00000606857 840 ntBASIC3.65□□□□□ -1.83
CBX1P83916 AC018754.1-201ENST00000607486 925 ntBASIC3.65□□□□□ -1.83
CBX1P83916 MIR6820-201ENST00000611508 62 ntBASIC3.65□□□□□ -1.83
CBX1P83916 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.65□□□□□ -1.83
CBX1P83916 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CBX1P83916 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.65□□□□□ -1.83
CBX1P83916 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CBX1P83916 AC025263.3-201ENST00000622965 1396 ntBASIC3.64□□□□□ -1.83
CBX1P83916 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CBX1P83916 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.64□□□□□ -1.83
CBX1P83916 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.64□□□□□ -1.83
CBX1P83916 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.64□□□□□ -1.83
CBX1P83916 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CBX1P83916 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CBX1P83916 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CBX1P83916 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.64□□□□□ -1.83
CBX1P83916 RNA5SP505-201ENST00000364748 108 ntBASIC3.64□□□□□ -1.83
CBX1P83916 RNA5SP189-201ENST00000364920 115 ntBASIC3.64□□□□□ -1.83
CBX1P83916 RNU6-398P-201ENST00000384143 109 ntBASIC3.64□□□□□ -1.83
CBX1P83916 MIR192-201ENST00000384915 110 ntBASIC3.64□□□□□ -1.83
CBX1P83916 RPL31P2-201ENST00000413849 377 ntBASIC3.64□□□□□ -1.83
CBX1P83916 RBMY2KP-201ENST00000418221 992 ntBASIC3.64□□□□□ -1.83
CBX1P83916 MTCYBP24-201ENST00000420387 1106 ntBASIC3.64□□□□□ -1.83
CBX1P83916 CNOT7P1-201ENST00000429006 852 ntBASIC3.64□□□□□ -1.83
CBX1P83916 AC010881.1-201ENST00000433830 235 ntBASIC3.64□□□□□ -1.83
CBX1P83916 HMGB1P45-201ENST00000435986 653 ntBASIC3.64□□□□□ -1.83
CBX1P83916 YWHAZP7-201ENST00000436906 631 ntBASIC3.64□□□□□ -1.83
CBX1P83916 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.64□□□□□ -1.83
CBX1P83916 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CBX1P83916 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.64□□□□□ -1.83
CBX1P83916 NCOR1P1-202ENST00000486162 291 ntBASIC3.64□□□□□ -1.83
CBX1P83916 AL132838.2-201ENST00000492041 314 ntBASIC3.64□□□□□ -1.83
CBX1P83916 AC022695.1-201ENST00000522089 237 ntBASIC3.64□□□□□ -1.83
CBX1P83916 IGJP1-201ENST00000522682 475 ntBASIC3.64□□□□□ -1.83
CBX1P83916 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.64□□□□□ -1.83
CBX1P83916 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.64□□□□□ -1.83
CBX1P83916 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.64□□□□□ -1.83
CBX1P83916 AC023824.3-201ENST00000569003 562 ntBASIC3.64□□□□□ -1.83
CBX1P83916 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.64□□□□□ -1.83
CBX1P83916 IPO5P1-202ENST00000600039 287 ntBASIC3.64□□□□□ -1.83
CBX1P83916 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.64□□□□□ -1.83
CBX1P83916 U73479.1-201ENST00000618062 168 ntBASIC3.64□□□□□ -1.83
CBX1P83916 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.64□□□□□ -1.83
CBX1P83916 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CBX1P83916 AC068620.4-201ENST00000636730 1182 ntBASIC3.64□□□□□ -1.83
CBX1P83916 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.63□□□□□ -1.83
CBX1P83916 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CBX1P83916 AC073055.1-201ENST00000456901 1621 ntBASIC3.63□□□□□ -1.83
CBX1P83916 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.63□□□□□ -1.83
CBX1P83916 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CBX1P83916 SNORA31-201ENST00000362607 130 ntBASIC3.63□□□□□ -1.83
CBX1P83916 RN7SKP280-201ENST00000364196 304 ntBASIC3.63□□□□□ -1.83
CBX1P83916 RNU1-132P-201ENST00000364300 164 ntBASIC3.63□□□□□ -1.83
CBX1P83916 MIR591-201ENST00000385290 95 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms