Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.32□□□□□ -1.88
SKP1P63208 MIR1254-2-201ENST00000579553 63 ntBASIC3.32□□□□□ -1.88
SKP1P63208 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.32□□□□□ -1.88
SKP1P63208 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SKP1P63208 AL365400.2-201ENST00000605604 902 ntBASIC3.32□□□□□ -1.88
SKP1P63208 AC019176.2-201ENST00000611579 315 ntBASIC3.32□□□□□ -1.88
SKP1P63208 AL359535.1-201ENST00000612100 1087 ntBASIC3.32□□□□□ -1.88
SKP1P63208 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.32□□□□□ -1.88
SKP1P63208 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SKP1P63208 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SKP1P63208 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SKP1P63208 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.32□□□□□ -1.88
SKP1P63208 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SKP1P63208 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SKP1P63208 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SKP1P63208 AC007656.2-201ENST00000624902 4547 ntBASIC3.32□□□□□ -1.88
SKP1P63208 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SKP1P63208 XPOTP1-201ENST00000443317 2398 ntBASIC3.31□□□□□ -1.88
SKP1P63208 AC068647.1-201ENST00000489539 2265 ntBASIC3.31□□□□□ -1.88
SKP1P63208 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.31□□□□□ -1.88
SKP1P63208 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.31□□□□□ -1.88
SKP1P63208 FRG1CP-201ENST00000358464 769 ntBASIC3.31□□□□□ -1.88
SKP1P63208 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.31□□□□□ -1.88
SKP1P63208 ATP5F1P3-201ENST00000397213 657 ntBASIC3.31□□□□□ -1.88
SKP1P63208 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.31□□□□□ -1.88
SKP1P63208 MTCO3P4-201ENST00000419236 787 ntBASIC3.31□□□□□ -1.88
SKP1P63208 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.31□□□□□ -1.88
SKP1P63208 RBMY2UP-201ENST00000453474 324 ntBASIC3.31□□□□□ -1.88
SKP1P63208 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.31□□□□□ -1.88
SKP1P63208 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SKP1P63208 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.31□□□□□ -1.88
SKP1P63208 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.31□□□□□ -1.88
SKP1P63208 COX6B1P6-201ENST00000522347 255 ntBASIC3.31□□□□□ -1.88
SKP1P63208 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.31□□□□□ -1.88
SKP1P63208 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.31□□□□□ -1.88
SKP1P63208 AL163153.1-201ENST00000554223 283 ntBASIC3.31□□□□□ -1.88
SKP1P63208 OR4T1P-201ENST00000554933 911 ntBASIC3.31□□□□□ -1.88
SKP1P63208 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.31□□□□□ -1.88
SKP1P63208 AC008121.2-201ENST00000614647 523 ntBASIC3.31□□□□□ -1.88
SKP1P63208 MIR6075-201ENST00000620782 95 ntBASIC3.31□□□□□ -1.88
SKP1P63208 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SKP1P63208 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
SKP1P63208 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SKP1P63208 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SKP1P63208 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.31□□□□□ -1.88
SKP1P63208 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SKP1P63208 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.3□□□□□ -1.88
SKP1P63208 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.3□□□□□ -1.88
SKP1P63208 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.3□□□□□ -1.88
SKP1P63208 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SKP1P63208 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SKP1P63208 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SKP1P63208 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SKP1P63208 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SKP1P63208 BTBD10P2-201ENST00000404779 676 ntBASIC3.3□□□□□ -1.88
SKP1P63208 RSL24D1P1-201ENST00000404972 493 ntBASIC3.3□□□□□ -1.88
SKP1P63208 AL138880.1-201ENST00000405824 642 ntBASIC3.3□□□□□ -1.88
SKP1P63208 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.3□□□□□ -1.88
SKP1P63208 MTND4P22-201ENST00000413116 1169 ntBASIC3.3□□□□□ -1.88
SKP1P63208 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.3□□□□□ -1.88
SKP1P63208 AC023128.2-201ENST00000420880 1223 ntBASIC3.3□□□□□ -1.88
SKP1P63208 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SKP1P63208 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.3□□□□□ -1.88
SKP1P63208 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.3□□□□□ -1.88
SKP1P63208 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.3□□□□□ -1.88
SKP1P63208 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.3□□□□□ -1.88
SKP1P63208 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.3□□□□□ -1.88
SKP1P63208 AC091286.1-201ENST00000431233 461 ntBASIC3.3□□□□□ -1.88
SKP1P63208 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SKP1P63208 AC044797.1-201ENST00000445744 679 ntBASIC3.3□□□□□ -1.88
SKP1P63208 HMGB1P48-201ENST00000446155 598 ntBASIC3.3□□□□□ -1.88
SKP1P63208 HMGB1P5-202ENST00000451497 985 ntBASIC3.3□□□□□ -1.88
SKP1P63208 snoU13.7-201ENST00000459220 104 ntBASIC3.3□□□□□ -1.88
SKP1P63208 AC104689.1-201ENST00000473356 768 ntBASIC3.3□□□□□ -1.88
SKP1P63208 TRBV8-2-201ENST00000475637 270 ntBASIC3.3□□□□□ -1.88
SKP1P63208 AC104687.1-201ENST00000485829 412 ntBASIC3.3□□□□□ -1.88
SKP1P63208 ACTG1P13-201ENST00000486987 1043 ntBASIC3.3□□□□□ -1.88
SKP1P63208 RPS3AP50-201ENST00000487064 803 ntBASIC3.3□□□□□ -1.88
SKP1P63208 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.3□□□□□ -1.88
SKP1P63208 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.3□□□□□ -1.88
SKP1P63208 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.3□□□□□ -1.88
SKP1P63208 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SKP1P63208 OR5AP1P-201ENST00000529730 940 ntBASIC3.3□□□□□ -1.88
SKP1P63208 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.3□□□□□ -1.88
SKP1P63208 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.3□□□□□ -1.88
SKP1P63208 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
SKP1P63208 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.3□□□□□ -1.88
SKP1P63208 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.3□□□□□ -1.88
SKP1P63208 AL592295.2-201ENST00000612578 206 ntBASIC3.3□□□□□ -1.88
SKP1P63208 U4.6-201ENST00000621618 127 ntBASIC3.3□□□□□ -1.88
SKP1P63208 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.3□□□□□ -1.88
SKP1P63208 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.3□□□□□ -1.88
SKP1P63208 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SKP1P63208 NSRP1P1-201ENST00000444067 1693 ntBASIC3.3□□□□□ -1.88
SKP1P63208 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.29□□□□□ -1.88
SKP1P63208 AC017071.1-201ENST00000564407 2204 ntBASIC3.29□□□□□ -1.88
SKP1P63208 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SKP1P63208 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SKP1P63208 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
SKP1P63208 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms