Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.93□□□□□ -1.78
HMGCS2P54868 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.93□□□□□ -1.78
HMGCS2P54868 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.93□□□□□ -1.78
HMGCS2P54868 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HMGCS2P54868 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
HMGCS2P54868 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HMGCS2P54868 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.92□□□□□ -1.78
HMGCS2P54868 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HMGCS2P54868 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HMGCS2P54868 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HMGCS2P54868 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HMGCS2P54868 U3.26-201ENST00000391236 204 ntBASIC3.92□□□□□ -1.78
HMGCS2P54868 AL355143.1-201ENST00000407101 841 ntBASIC3.92□□□□□ -1.78
HMGCS2P54868 RNU2-17P-201ENST00000410290 190 ntBASIC3.92□□□□□ -1.78
HMGCS2P54868 AL160275.2-201ENST00000412010 394 ntBASIC3.92□□□□□ -1.78
HMGCS2P54868 TATDN1P1-201ENST00000414123 891 ntBASIC3.92□□□□□ -1.78
HMGCS2P54868 RPL21P109-201ENST00000422213 475 ntBASIC3.92□□□□□ -1.78
HMGCS2P54868 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.92□□□□□ -1.78
HMGCS2P54868 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGCS2P54868 AL031663.1-201ENST00000437445 219 ntBASIC3.92□□□□□ -1.78
HMGCS2P54868 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGCS2P54868 AL831737.1-201ENST00000441288 271 ntBASIC3.92□□□□□ -1.78
HMGCS2P54868 AL096829.2-201ENST00000446582 742 ntBASIC3.92□□□□□ -1.78
HMGCS2P54868 HMGB1P26-201ENST00000452520 628 ntBASIC3.92□□□□□ -1.78
HMGCS2P54868 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGCS2P54868 AC011037.1-201ENST00000483964 558 ntBASIC3.92□□□□□ -1.78
HMGCS2P54868 FTH1P9-201ENST00000513251 355 ntBASIC3.92□□□□□ -1.78
HMGCS2P54868 RNA5SP341-201ENST00000516261 117 ntBASIC3.92□□□□□ -1.78
HMGCS2P54868 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGCS2P54868 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.92□□□□□ -1.78
HMGCS2P54868 AC022790.1-201ENST00000522872 204 ntBASIC3.92□□□□□ -1.78
HMGCS2P54868 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGCS2P54868 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGCS2P54868 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HMGCS2P54868 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGCS2P54868 EIF4BP1-201ENST00000554881 351 ntBASIC3.92□□□□□ -1.78
HMGCS2P54868 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGCS2P54868 AC133794.1-201ENST00000602731 914 ntBASIC3.92□□□□□ -1.78
HMGCS2P54868 BNIP3P31-201ENST00000604515 566 ntBASIC3.92□□□□□ -1.78
HMGCS2P54868 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGCS2P54868 OR6R2P-201ENST00000609216 300 ntBASIC3.92□□□□□ -1.78
HMGCS2P54868 AC015813.4-201ENST00000610469 179 ntBASIC3.92□□□□□ -1.78
HMGCS2P54868 AP004607.9-201ENST00000618202 316 ntBASIC3.92□□□□□ -1.78
HMGCS2P54868 AP000943.4-201ENST00000622912 357 ntBASIC3.92□□□□□ -1.78
HMGCS2P54868 AC000123.2-201ENST00000623124 461 ntBASIC3.92□□□□□ -1.78
HMGCS2P54868 AC010872.1-201ENST00000624225 675 ntBASIC3.92□□□□□ -1.78
HMGCS2P54868 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.92□□□□□ -1.78
HMGCS2P54868 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HMGCS2P54868 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HMGCS2P54868 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HMGCS2P54868 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
HMGCS2P54868 TNPO1P3-201ENST00000436471 2662 ntBASIC3.91□□□□□ -1.78
HMGCS2P54868 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCS2P54868 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
HMGCS2P54868 RNU6-1279P-201ENST00000383917 103 ntBASIC3.91□□□□□ -1.78
HMGCS2P54868 GSTA8P-201ENST00000404253 637 ntBASIC3.91□□□□□ -1.78
HMGCS2P54868 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.91□□□□□ -1.78
HMGCS2P54868 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.91□□□□□ -1.78
HMGCS2P54868 AC105402.1-201ENST00000413336 545 ntBASIC3.91□□□□□ -1.78
HMGCS2P54868 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.91□□□□□ -1.78
HMGCS2P54868 AL353678.1-201ENST00000422735 741 ntBASIC3.91□□□□□ -1.78
HMGCS2P54868 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.91□□□□□ -1.78
HMGCS2P54868 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.91□□□□□ -1.78
HMGCS2P54868 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.91□□□□□ -1.78
HMGCS2P54868 RPS24P8-201ENST00000431490 402 ntBASIC3.91□□□□□ -1.78
HMGCS2P54868 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.91□□□□□ -1.78
HMGCS2P54868 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCS2P54868 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.91□□□□□ -1.78
HMGCS2P54868 RPL37P3-201ENST00000456825 293 ntBASIC3.91□□□□□ -1.78
HMGCS2P54868 S100A11P2-201ENST00000467589 312 ntBASIC3.91□□□□□ -1.78
HMGCS2P54868 AC025445.1-201ENST00000502728 300 ntBASIC3.91□□□□□ -1.78
HMGCS2P54868 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.91□□□□□ -1.78
HMGCS2P54868 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.91□□□□□ -1.78
HMGCS2P54868 BTF3L4P4-201ENST00000506381 449 ntBASIC3.91□□□□□ -1.78
HMGCS2P54868 APOOP4-201ENST00000513530 597 ntBASIC3.91□□□□□ -1.78
HMGCS2P54868 RNU6-1004P-201ENST00000516584 111 ntBASIC3.91□□□□□ -1.78
HMGCS2P54868 SNORA31.13-201ENST00000516624 135 ntBASIC3.91□□□□□ -1.78
HMGCS2P54868 AC090136.1-201ENST00000520009 240 ntBASIC3.91□□□□□ -1.78
HMGCS2P54868 AC026333.2-201ENST00000542164 106 ntBASIC3.91□□□□□ -1.78
HMGCS2P54868 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.91□□□□□ -1.78
HMGCS2P54868 AC005476.1-201ENST00000554427 397 ntBASIC3.91□□□□□ -1.78
HMGCS2P54868 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.91□□□□□ -1.78
HMGCS2P54868 AL049870.4-201ENST00000555741 486 ntBASIC3.91□□□□□ -1.78
HMGCS2P54868 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.91□□□□□ -1.78
HMGCS2P54868 MIR4458-201ENST00000578872 75 ntBASIC3.91□□□□□ -1.78
HMGCS2P54868 AC090525.3-201ENST00000605601 189 ntBASIC3.91□□□□□ -1.78
HMGCS2P54868 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.91□□□□□ -1.78
HMGCS2P54868 AC009464.1-201ENST00000615731 469 ntBASIC3.91□□□□□ -1.78
HMGCS2P54868 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.91□□□□□ -1.78
HMGCS2P54868 AC067852.7-201ENST00000623270 535 ntBASIC3.91□□□□□ -1.78
HMGCS2P54868 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.91□□□□□ -1.78
HMGCS2P54868 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCS2P54868 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.91□□□□□ -1.78
HMGCS2P54868 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCS2P54868 KPNA2P2-201ENST00000419546 1489 ntBASIC3.91□□□□□ -1.78
HMGCS2P54868 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.91□□□□□ -1.78
HMGCS2P54868 MTND5P11-201ENST00000511037 1812 ntBASIC3.91□□□□□ -1.78
HMGCS2P54868 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HMGCS2P54868 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.9□□□□□ -1.78
HMGCS2P54868 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms