Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.17□□□□□ -1.74
CLCNKAP51800 AC023043.4-201ENST00000612081 449 ntBASIC4.17□□□□□ -1.74
CLCNKAP51800 AC090246.1-201ENST00000616499 426 ntBASIC4.17□□□□□ -1.74
CLCNKAP51800 AC243756.2-201ENST00000618406 463 ntBASIC4.17□□□□□ -1.74
CLCNKAP51800 AL731566.2-201ENST00000618971 317 ntBASIC4.17□□□□□ -1.74
CLCNKAP51800 RMST_9.1-201ENST00000619945 193 ntBASIC4.17□□□□□ -1.74
CLCNKAP51800 AL356121.2-201ENST00000624715 780 ntBASIC4.17□□□□□ -1.74
CLCNKAP51800 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.17□□□□□ -1.74
CLCNKAP51800 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.17□□□□□ -1.74
CLCNKAP51800 AC008013.2-202ENST00000637965 364 ntBASIC4.17□□□□□ -1.74
CLCNKAP51800 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.17□□□□□ -1.74
CLCNKAP51800 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CLCNKAP51800 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLCNKAP51800 ZNF33CP-201ENST00000432492 2030 ntBASIC4.17□□□□□ -1.74
CLCNKAP51800 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLCNKAP51800 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLCNKAP51800 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.16□□□□□ -1.74
CLCNKAP51800 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLCNKAP51800 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.16□□□□□ -1.74
CLCNKAP51800 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLCNKAP51800 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLCNKAP51800 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.16□□□□□ -1.74
CLCNKAP51800 SGO1P2-201ENST00000429458 1589 ntBASIC4.16□□□□□ -1.74
CLCNKAP51800 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CLCNKAP51800 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLCNKAP51800 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLCNKAP51800 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CLCNKAP51800 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.16□□□□□ -1.74
CLCNKAP51800 HNRNPDP2-201ENST00000406475 478 ntBASIC4.16□□□□□ -1.74
CLCNKAP51800 RPL23AP48-201ENST00000406913 488 ntBASIC4.16□□□□□ -1.74
CLCNKAP51800 RNU4-72P-201ENST00000410754 173 ntBASIC4.16□□□□□ -1.74
CLCNKAP51800 BOLA3P4-201ENST00000418151 400 ntBASIC4.16□□□□□ -1.74
CLCNKAP51800 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.16□□□□□ -1.74
CLCNKAP51800 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.16□□□□□ -1.74
CLCNKAP51800 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.16□□□□□ -1.74
CLCNKAP51800 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.16□□□□□ -1.74
CLCNKAP51800 RPL37P1-201ENST00000432310 284 ntBASIC4.16□□□□□ -1.74
CLCNKAP51800 MTCO2P25-201ENST00000447065 681 ntBASIC4.16□□□□□ -1.74
CLCNKAP51800 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.16□□□□□ -1.74
CLCNKAP51800 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.16□□□□□ -1.74
CLCNKAP51800 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.16□□□□□ -1.74
CLCNKAP51800 RNA5SP246-201ENST00000458909 119 ntBASIC4.16□□□□□ -1.74
CLCNKAP51800 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.16□□□□□ -1.74
CLCNKAP51800 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.16□□□□□ -1.74
CLCNKAP51800 AP000926.1-201ENST00000479573 241 ntBASIC4.16□□□□□ -1.74
CLCNKAP51800 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.16□□□□□ -1.74
CLCNKAP51800 AC117522.2-201ENST00000510049 657 ntBASIC4.16□□□□□ -1.74
CLCNKAP51800 AC079395.1-201ENST00000510981 262 ntBASIC4.16□□□□□ -1.74
CLCNKAP51800 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.16□□□□□ -1.74
CLCNKAP51800 AC010587.2-201ENST00000511727 448 ntBASIC4.16□□□□□ -1.74
CLCNKAP51800 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CLCNKAP51800 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.16□□□□□ -1.74
CLCNKAP51800 RN7SKP31-201ENST00000516354 278 ntBASIC4.16□□□□□ -1.74
CLCNKAP51800 Y_RNA.688-201ENST00000516565 95 ntBASIC4.16□□□□□ -1.74
CLCNKAP51800 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.16□□□□□ -1.74
CLCNKAP51800 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.16□□□□□ -1.74
CLCNKAP51800 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CLCNKAP51800 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.16□□□□□ -1.74
CLCNKAP51800 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.16□□□□□ -1.74
CLCNKAP51800 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.16□□□□□ -1.74
CLCNKAP51800 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.16□□□□□ -1.74
CLCNKAP51800 AC079171.1-201ENST00000568788 914 ntBASIC4.16□□□□□ -1.74
CLCNKAP51800 AP001180.3-201ENST00000582221 145 ntBASIC4.16□□□□□ -1.74
CLCNKAP51800 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.16□□□□□ -1.74
CLCNKAP51800 AC004223.2-201ENST00000590309 544 ntBASIC4.16□□□□□ -1.74
CLCNKAP51800 Z94722.1-201ENST00000604328 474 ntBASIC4.16□□□□□ -1.74
CLCNKAP51800 AC073348.1-201ENST00000623002 331 ntBASIC4.16□□□□□ -1.74
CLCNKAP51800 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.16□□□□□ -1.74
CLCNKAP51800 AC103706.2-201ENST00000638080 240 ntBASIC4.16□□□□□ -1.74
CLCNKAP51800 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CLCNKAP51800 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CLCNKAP51800 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CLCNKAP51800 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.16□□□□□ -1.74
CLCNKAP51800 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLCNKAP51800 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLCNKAP51800 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.16□□□□□ -1.74
CLCNKAP51800 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLCNKAP51800 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CLCNKAP51800 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLCNKAP51800 AP000526.1-201ENST00000603308 1388 ntBASIC4.15□□□□□ -1.74
CLCNKAP51800 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
CLCNKAP51800 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CLCNKAP51800 MTCO1P14-201ENST00000441695 1559 ntBASIC4.15□□□□□ -1.74
CLCNKAP51800 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CLCNKAP51800 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CLCNKAP51800 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CLCNKAP51800 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 XIAPP3-201ENST00000312918 795 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLCNKAP51800 RHOT1P2-201ENST00000366423 333 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLCNKAP51800 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLCNKAP51800 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
CLCNKAP51800 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.15□□□□□ -1.75
CLCNKAP51800 TMSB4XP8-201ENST00000402089 135 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 PRRC2CP1-201ENST00000404428 159 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.15□□□□□ -1.75
CLCNKAP51800 RNA5SP39-201ENST00000411245 120 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.15□□□□□ -1.75
CLCNKAP51800 TMSB4XP6-201ENST00000415187 135 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms