Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.06□□□□□ -1.92
BRCA2P51587 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
BRCA2P51587 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
BRCA2P51587 OR4G2P-202ENST00000641004 1759 ntBASIC3.06□□□□□ -1.92
BRCA2P51587 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC3.06□□□□□ -1.92
BRCA2P51587 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
BRCA2P51587 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.06□□□□□ -1.92
BRCA2P51587 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.06□□□□□ -1.92
BRCA2P51587 TRAV37-201ENST00000553906 342 ntBASIC3.06□□□□□ -1.92
BRCA2P51587 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
BRCA2P51587 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
BRCA2P51587 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
BRCA2P51587 AC005005.4-201ENST00000623789 16698 ntBASIC3.06□□□□□ -1.92
BRCA2P51587 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
BRCA2P51587 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC3.06□□□□□ -1.92
BRCA2P51587 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
BRCA2P51587 RPL21P132-201ENST00000331267 462 ntBASIC3.06□□□□□ -1.92
BRCA2P51587 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.06□□□□□ -1.92
BRCA2P51587 HMGB1P15-201ENST00000453854 435 ntBASIC3.06□□□□□ -1.92
BRCA2P51587 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.06□□□□□ -1.92
BRCA2P51587 AC005921.1-201ENST00000510589 286 ntBASIC3.06□□□□□ -1.92
BRCA2P51587 ISCA1P3-201ENST00000577104 373 ntBASIC3.06□□□□□ -1.92
BRCA2P51587 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.06□□□□□ -1.92
BRCA2P51587 FAM35DP-201ENST00000323387 2712 ntBASIC3.06□□□□□ -1.92
BRCA2P51587 DDX18P3-201ENST00000404856 2007 ntBASIC3.05□□□□□ -1.92
BRCA2P51587 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
BRCA2P51587 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
BRCA2P51587 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.05□□□□□ -1.92
BRCA2P51587 RNA5SP322-201ENST00000363617 119 ntBASIC3.05□□□□□ -1.92
BRCA2P51587 SNORA17.3-201ENST00000391159 129 ntBASIC3.05□□□□□ -1.92
BRCA2P51587 NANOGP6-201ENST00000429190 847 ntBASIC3.05□□□□□ -1.92
BRCA2P51587 YWHAEP5-201ENST00000431545 765 ntBASIC3.05□□□□□ -1.92
BRCA2P51587 RN7SKP82-201ENST00000516786 223 ntBASIC3.05□□□□□ -1.92
BRCA2P51587 UBTFL10-201ENST00000528532 562 ntBASIC3.05□□□□□ -1.92
BRCA2P51587 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
BRCA2P51587 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.05□□□□□ -1.92
BRCA2P51587 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
BRCA2P51587 MIR8070-201ENST00000616510 88 ntBASIC3.05□□□□□ -1.92
BRCA2P51587 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
BRCA2P51587 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.05□□□□□ -1.92
BRCA2P51587 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC3.05□□□□□ -1.92
BRCA2P51587 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
BRCA2P51587 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
BRCA2P51587 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
BRCA2P51587 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.05□□□□□ -1.92
BRCA2P51587 AC126121.1-201ENST00000482313 553 ntBASIC3.05□□□□□ -1.92
BRCA2P51587 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.05□□□□□ -1.92
BRCA2P51587 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.05□□□□□ -1.92
BRCA2P51587 AC103810.6-201ENST00000606708 136 ntBASIC3.05□□□□□ -1.92
BRCA2P51587 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC3.05□□□□□ -1.92
BRCA2P51587 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.05□□□□□ -1.92
BRCA2P51587 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC3.05□□□□□ -1.92
BRCA2P51587 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
BRCA2P51587 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.05□□□□□ -1.92
BRCA2P51587 AC108729.3-201ENST00000513484 108 ntBASIC3.05□□□□□ -1.92
BRCA2P51587 SCARNA17.1-201ENST00000516211 143 ntBASIC3.05□□□□□ -1.92
BRCA2P51587 SCARNA17.2-201ENST00000516334 143 ntBASIC3.05□□□□□ -1.92
BRCA2P51587 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.05□□□□□ -1.92
BRCA2P51587 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.05□□□□□ -1.92
BRCA2P51587 MIR1273D-201ENST00000577266 86 ntBASIC3.05□□□□□ -1.92
BRCA2P51587 SCARNA17.4-201ENST00000614296 143 ntBASIC3.05□□□□□ -1.92
BRCA2P51587 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.05□□□□□ -1.92
BRCA2P51587 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.05□□□□□ -1.92
BRCA2P51587 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
BRCA2P51587 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.04□□□□□ -1.92
BRCA2P51587 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
BRCA2P51587 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
BRCA2P51587 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.04□□□□□ -1.92
BRCA2P51587 THAP12P8-201ENST00000447914 2115 ntBASIC3.04□□□□□ -1.92
BRCA2P51587 MIR181A2-201ENST00000384863 110 ntBASIC3.04□□□□□ -1.92
BRCA2P51587 AC093663.2-201ENST00000484625 313 ntBASIC3.04□□□□□ -1.92
BRCA2P51587 AC007938.3-201ENST00000604965 623 ntBASIC3.04□□□□□ -1.92
BRCA2P51587 NF1P10-201ENST00000613227 742 ntBASIC3.04□□□□□ -1.92
BRCA2P51587 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
BRCA2P51587 AL035425.3-201ENST00000564206 4996 ntBASIC3.04□□□□□ -1.92
BRCA2P51587 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC3.04□□□□□ -1.92
BRCA2P51587 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.04□□□□□ -1.92
BRCA2P51587 RNU4-53P-201ENST00000410828 140 ntBASIC3.04□□□□□ -1.92
BRCA2P51587 RNA5SP31-201ENST00000411144 127 ntBASIC3.04□□□□□ -1.92
BRCA2P51587 AL356320.1-201ENST00000429616 163 ntBASIC3.04□□□□□ -1.92
BRCA2P51587 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.04□□□□□ -1.92
BRCA2P51587 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
BRCA2P51587 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.04□□□□□ -1.92
BRCA2P51587 AC091903.1-201ENST00000624322 454 ntBASIC3.04□□□□□ -1.92
BRCA2P51587 AC092608.2-201ENST00000624427 218 ntBASIC3.04□□□□□ -1.92
BRCA2P51587 AC019080.5-201ENST00000624891 757 ntBASIC3.04□□□□□ -1.92
BRCA2P51587 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
BRCA2P51587 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
BRCA2P51587 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
BRCA2P51587 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.03□□□□□ -1.92
BRCA2P51587 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.03□□□□□ -1.92
BRCA2P51587 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
BRCA2P51587 AC093524.1-201ENST00000564266 1094 ntBASIC3.03□□□□□ -1.92
BRCA2P51587 AC138965.3-201ENST00000623875 498 ntBASIC3.03□□□□□ -1.92
BRCA2P51587 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
BRCA2P51587 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
BRCA2P51587 MAPK10-286ENST00000641208 8747 ntBASIC3.03□□□□□ -1.92
BRCA2P51587 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
BRCA2P51587 MIR518C-201ENST00000384822 101 ntBASIC3.03□□□□□ -1.92
BRCA2P51587 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms