Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 DHX9P1-201ENST00000436565 3076 ntBASIC4.93□□□□□ -1.62
TM4SF4P48230 AL672167.1-205ENST00000641112 3080 ntBASIC4.93□□□□□ -1.62
TM4SF4P48230 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TM4SF4P48230 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TM4SF4P48230 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.92□□□□□ -1.62
TM4SF4P48230 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.92□□□□□ -1.62
TM4SF4P48230 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TM4SF4P48230 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TM4SF4P48230 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
TM4SF4P48230 MTCO1P14-201ENST00000441695 1559 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
TM4SF4P48230 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TM4SF4P48230 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TM4SF4P48230 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TM4SF4P48230 Y_RNA.169-201ENST00000363745 96 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
TM4SF4P48230 RNU6-213P-201ENST00000384051 104 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 PTMAP5-201ENST00000393073 333 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.92□□□□□ -1.62
TM4SF4P48230 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TM4SF4P48230 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.92□□□□□ -1.62
TM4SF4P48230 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.92□□□□□ -1.62
TM4SF4P48230 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.92□□□□□ -1.62
TM4SF4P48230 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.92□□□□□ -1.62
TM4SF4P48230 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.92□□□□□ -1.62
TM4SF4P48230 MTND5P2-201ENST00000442927 1142 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 MRPL48P1-201ENST00000445390 636 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 AL162388.1-201ENST00000450912 352 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.92□□□□□ -1.62
TM4SF4P48230 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.92□□□□□ -1.62
TM4SF4P48230 RPL5P30-201ENST00000465511 891 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 AC090686.1-201ENST00000481577 749 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 AC010486.2-201ENST00000505572 483 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.92□□□□□ -1.62
TM4SF4P48230 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TM4SF4P48230 XKRY-201ENST00000510392 1100 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 MRPS33P3-201ENST00000513456 322 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.92□□□□□ -1.62
TM4SF4P48230 RNU6-1129P-201ENST00000515964 104 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 RNU6-513P-201ENST00000516104 104 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 SNORA70.24-201ENST00000517233 118 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 AC026403.1-201ENST00000518938 295 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.92□□□□□ -1.62
TM4SF4P48230 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.92□□□□□ -1.62
TM4SF4P48230 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.92□□□□□ -1.62
TM4SF4P48230 AL389895.1-201ENST00000554127 252 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.92□□□□□ -1.62
TM4SF4P48230 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.92□□□□□ -1.62
TM4SF4P48230 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.92□□□□□ -1.62
TM4SF4P48230 BNIP3P24-201ENST00000593398 557 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.92□□□□□ -1.62
TM4SF4P48230 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.92□□□□□ -1.62
TM4SF4P48230 AP003117.2-201ENST00000606010 545 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.92□□□□□ -1.62
TM4SF4P48230 AL607023.1-201ENST00000620045 248 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 AC005858.4-201ENST00000623191 700 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.92□□□□□ -1.62
TM4SF4P48230 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TM4SF4P48230 FP325313.1-201ENST00000638228 703 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.92□□□□□ -1.62
TM4SF4P48230 AC090229.1-201ENST00000590983 1609 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.92□□□□□ -1.62
TM4SF4P48230 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.92□□□□□ -1.62
TM4SF4P48230 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
TM4SF4P48230 AP002512.4-202ENST00000641599 4530 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 AL356489.2-201ENST00000566968 3528 ntBASIC4.92□□□□□ -1.62
TM4SF4P48230 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
TM4SF4P48230 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
TM4SF4P48230 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
TM4SF4P48230 MAPK10-372ENST00000641954 3413 ntBASIC4.91□□□□□ -1.62
TM4SF4P48230 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TM4SF4P48230 LINC00561-201ENST00000565815 2738 ntBASIC4.91□□□□□ -1.62
TM4SF4P48230 NXPH1-205ENST00000602349 1953 ntBASIC4.91□□□□□ -1.62
TM4SF4P48230 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TM4SF4P48230 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TM4SF4P48230 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TM4SF4P48230 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
TM4SF4P48230 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
TM4SF4P48230 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
TM4SF4P48230 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.91□□□□□ -1.62
TM4SF4P48230 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TM4SF4P48230 SNORA51.6-201ENST00000384151 125 ntBASIC4.91□□□□□ -1.62
TM4SF4P48230 SNORA70E-201ENST00000384492 135 ntBASIC4.91□□□□□ -1.62
TM4SF4P48230 RPS15AP38-201ENST00000413110 372 ntBASIC4.91□□□□□ -1.62
TM4SF4P48230 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.91□□□□□ -1.62
TM4SF4P48230 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.91□□□□□ -1.62
TM4SF4P48230 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.91□□□□□ -1.62
TM4SF4P48230 CYCSP10-201ENST00000417973 294 ntBASIC4.91□□□□□ -1.62
TM4SF4P48230 MTND2P18-201ENST00000419962 1030 ntBASIC4.91□□□□□ -1.62
TM4SF4P48230 PTP4A1P5-201ENST00000420305 455 ntBASIC4.91□□□□□ -1.62
TM4SF4P48230 EIF1P3-201ENST00000423841 334 ntBASIC4.91□□□□□ -1.62
TM4SF4P48230 CKS1BP6-201ENST00000424932 240 ntBASIC4.91□□□□□ -1.62
TM4SF4P48230 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.91□□□□□ -1.62
TM4SF4P48230 AC091286.1-201ENST00000431233 461 ntBASIC4.91□□□□□ -1.62
TM4SF4P48230 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.91□□□□□ -1.62
TM4SF4P48230 AL591503.2-201ENST00000442314 1005 ntBASIC4.91□□□□□ -1.62
TM4SF4P48230 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.91□□□□□ -1.62
TM4SF4P48230 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms