Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.83□□□□□ -1.8
BRCC3P46736 AC008494.2-201ENST00000514544 370 ntBASIC3.83□□□□□ -1.8
BRCC3P46736 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.83□□□□□ -1.8
BRCC3P46736 AC022790.1-201ENST00000522872 204 ntBASIC3.83□□□□□ -1.8
BRCC3P46736 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
BRCC3P46736 AC092851.1-201ENST00000535964 478 ntBASIC3.83□□□□□ -1.8
BRCC3P46736 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.83□□□□□ -1.8
BRCC3P46736 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.83□□□□□ -1.8
BRCC3P46736 VN1R79P-201ENST00000593540 513 ntBASIC3.83□□□□□ -1.8
BRCC3P46736 PCNAP1-202ENST00000595299 752 ntBASIC3.83□□□□□ -1.8
BRCC3P46736 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.83□□□□□ -1.8
BRCC3P46736 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.83□□□□□ -1.8
BRCC3P46736 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
BRCC3P46736 AL161756.2-201ENST00000604597 246 ntBASIC3.83□□□□□ -1.8
BRCC3P46736 AC006077.1-201ENST00000604746 343 ntBASIC3.83□□□□□ -1.8
BRCC3P46736 AL159169.3-201ENST00000608871 561 ntBASIC3.83□□□□□ -1.8
BRCC3P46736 AL732618.1-201ENST00000623251 301 ntBASIC3.83□□□□□ -1.8
BRCC3P46736 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.83□□□□□ -1.8
BRCC3P46736 AC009452.1-201ENST00000640823 606 ntBASIC3.83□□□□□ -1.8
BRCC3P46736 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.83□□□□□ -1.8
BRCC3P46736 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.83□□□□□ -1.8
BRCC3P46736 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.83□□□□□ -1.8
BRCC3P46736 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
BRCC3P46736 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
BRCC3P46736 AL645568.2-201ENST00000432815 1337 ntBASIC3.82□□□□□ -1.8
BRCC3P46736 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
BRCC3P46736 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
BRCC3P46736 RNU4-35P-201ENST00000362588 141 ntBASIC3.82□□□□□ -1.8
BRCC3P46736 RNA5SP50-201ENST00000363731 107 ntBASIC3.82□□□□□ -1.8
BRCC3P46736 RNA5SP27-201ENST00000363839 119 ntBASIC3.82□□□□□ -1.8
BRCC3P46736 MIR122-201ENST00000385044 85 ntBASIC3.82□□□□□ -1.8
BRCC3P46736 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
BRCC3P46736 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.82□□□□□ -1.8
BRCC3P46736 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.82□□□□□ -1.8
BRCC3P46736 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.82□□□□□ -1.8
BRCC3P46736 AC097713.2-201ENST00000430199 356 ntBASIC3.82□□□□□ -1.8
BRCC3P46736 AC023347.2-201ENST00000433994 462 ntBASIC3.82□□□□□ -1.8
BRCC3P46736 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.82□□□□□ -1.8
BRCC3P46736 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.82□□□□□ -1.8
BRCC3P46736 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.82□□□□□ -1.8
BRCC3P46736 AL645939.1-201ENST00000453429 797 ntBASIC3.82□□□□□ -1.8
BRCC3P46736 AL035407.2-201ENST00000454090 378 ntBASIC3.82□□□□□ -1.8
BRCC3P46736 AC008155.2-201ENST00000464337 397 ntBASIC3.82□□□□□ -1.8
BRCC3P46736 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.82□□□□□ -1.8
BRCC3P46736 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.82□□□□□ -1.8
BRCC3P46736 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.82□□□□□ -1.8
BRCC3P46736 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
BRCC3P46736 HSPD1P15-201ENST00000505573 1122 ntBASIC3.82□□□□□ -1.8
BRCC3P46736 AC109458.1-201ENST00000508858 316 ntBASIC3.82□□□□□ -1.8
BRCC3P46736 AC008565.1-201ENST00000509046 885 ntBASIC3.82□□□□□ -1.8
BRCC3P46736 AC010342.1-201ENST00000514047 877 ntBASIC3.82□□□□□ -1.8
BRCC3P46736 RN7SKP209-201ENST00000516888 304 ntBASIC3.82□□□□□ -1.8
BRCC3P46736 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.82□□□□□ -1.8
BRCC3P46736 AC010306.1-201ENST00000523223 1117 ntBASIC3.82□□□□□ -1.8
BRCC3P46736 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.82□□□□□ -1.8
BRCC3P46736 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.82□□□□□ -1.8
BRCC3P46736 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.82□□□□□ -1.8
BRCC3P46736 AC090312.2-201ENST00000582687 378 ntBASIC3.82□□□□□ -1.8
BRCC3P46736 AC017100.2-201ENST00000584628 355 ntBASIC3.82□□□□□ -1.8
BRCC3P46736 AC011492.1-201ENST00000600023 315 ntBASIC3.82□□□□□ -1.8
BRCC3P46736 EIF1P6-201ENST00000600054 334 ntBASIC3.82□□□□□ -1.8
BRCC3P46736 AL158050.2-201ENST00000605336 568 ntBASIC3.82□□□□□ -1.8
BRCC3P46736 AC112503.1-201ENST00000608436 391 ntBASIC3.82□□□□□ -1.8
BRCC3P46736 AC007275.1-201ENST00000621243 671 ntBASIC3.82□□□□□ -1.8
BRCC3P46736 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
BRCC3P46736 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
BRCC3P46736 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
BRCC3P46736 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
BRCC3P46736 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
BRCC3P46736 RNA5SP72-201ENST00000364442 117 ntBASIC3.81□□□□□ -1.8
BRCC3P46736 RNU6-1257P-201ENST00000384625 110 ntBASIC3.81□□□□□ -1.8
BRCC3P46736 RNU6-1000P-201ENST00000391066 106 ntBASIC3.81□□□□□ -1.8
BRCC3P46736 AL138878.1-201ENST00000405131 347 ntBASIC3.81□□□□□ -1.8
BRCC3P46736 MTATP6P31-201ENST00000406985 692 ntBASIC3.81□□□□□ -1.8
BRCC3P46736 HSPE1P8-201ENST00000406997 288 ntBASIC3.81□□□□□ -1.8
BRCC3P46736 MIR1303-201ENST00000408625 86 ntBASIC3.81□□□□□ -1.8
BRCC3P46736 AC004022.2-201ENST00000413824 193 ntBASIC3.81□□□□□ -1.8
BRCC3P46736 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BRCC3P46736 SDCBPP2-201ENST00000424643 885 ntBASIC3.81□□□□□ -1.8
BRCC3P46736 DEFB130D-201ENST00000426866 237 ntBASIC3.81□□□□□ -1.8
BRCC3P46736 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.81□□□□□ -1.8
BRCC3P46736 RPL21P110-201ENST00000433345 446 ntBASIC3.81□□□□□ -1.8
BRCC3P46736 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.81□□□□□ -1.8
BRCC3P46736 ELOCP11-201ENST00000436690 332 ntBASIC3.81□□□□□ -1.8
BRCC3P46736 AL356535.1-201ENST00000440335 398 ntBASIC3.81□□□□□ -1.8
BRCC3P46736 AC092809.1-201ENST00000441469 474 ntBASIC3.81□□□□□ -1.8
BRCC3P46736 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.81□□□□□ -1.8
BRCC3P46736 ELOCP16-201ENST00000444494 332 ntBASIC3.81□□□□□ -1.8
BRCC3P46736 RBMY2UP-201ENST00000453474 324 ntBASIC3.81□□□□□ -1.8
BRCC3P46736 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.81□□□□□ -1.8
BRCC3P46736 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
BRCC3P46736 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.81□□□□□ -1.8
BRCC3P46736 HMGB1P21-201ENST00000502313 581 ntBASIC3.81□□□□□ -1.8
BRCC3P46736 WBP1LP4-201ENST00000505043 344 ntBASIC3.81□□□□□ -1.8
BRCC3P46736 AC069306.1-201ENST00000507006 843 ntBASIC3.81□□□□□ -1.8
BRCC3P46736 AC119751.4-201ENST00000507498 357 ntBASIC3.81□□□□□ -1.8
BRCC3P46736 FTH1P9-201ENST00000513251 355 ntBASIC3.81□□□□□ -1.8
BRCC3P46736 RN7SKP82-201ENST00000516786 223 ntBASIC3.81□□□□□ -1.8
BRCC3P46736 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.81□□□□□ -1.8
BRCC3P46736 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms