Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 MTATP6P31-201ENST00000406985 692 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.54□□□□□ -1.84
TNFSF9P41273 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TNFSF9P41273 PRELID3BP11-201ENST00000414230 479 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.54□□□□□ -1.84
TNFSF9P41273 AC127526.1-201ENST00000417526 366 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 RPL31P45-201ENST00000419532 356 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 AC023347.2-201ENST00000433994 462 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.54□□□□□ -1.84
TNFSF9P41273 AC115115.1-201ENST00000449927 248 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 AC096992.1-201ENST00000459808 709 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 RN7SL807P-201ENST00000470923 297 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 TRBV8-2-201ENST00000475637 270 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 RN7SL504P-201ENST00000494496 287 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 AC090071.1-201ENST00000507713 644 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.54□□□□□ -1.84
TNFSF9P41273 PHBP14-201ENST00000512887 367 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 FTH1P9-201ENST00000513251 355 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.54□□□□□ -1.84
TNFSF9P41273 SCARNA13-201ENST00000516672 275 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.54□□□□□ -1.84
TNFSF9P41273 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.54□□□□□ -1.84
TNFSF9P41273 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.54□□□□□ -1.84
TNFSF9P41273 GTF2IP8-201ENST00000560687 584 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 MIR4425-201ENST00000580572 84 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 AC011471.1-201ENST00000585766 187 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 AC245128.3-201ENST00000594721 748 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.54□□□□□ -1.84
TNFSF9P41273 LLPHP1-201ENST00000603571 367 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 AC073657.2-201ENST00000605661 303 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.54□□□□□ -1.84
TNFSF9P41273 RNVU1-4-201ENST00000612985 164 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.54□□□□□ -1.84
TNFSF9P41273 C2orf27A-204ENST00000623058 969 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.54□□□□□ -1.84
TNFSF9P41273 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
TNFSF9P41273 AC024341.1-201ENST00000526444 1552 ntBASIC3.54□□□□□ -1.84
TNFSF9P41273 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
TNFSF9P41273 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
TNFSF9P41273 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.53□□□□□ -1.84
TNFSF9P41273 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TNFSF9P41273 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TNFSF9P41273 SNORA38.1-201ENST00000364172 131 ntBASIC3.53□□□□□ -1.84
TNFSF9P41273 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TNFSF9P41273 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.53□□□□□ -1.84
TNFSF9P41273 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TNFSF9P41273 RNU6-98P-201ENST00000384173 107 ntBASIC3.53□□□□□ -1.84
TNFSF9P41273 RNU6-40P-201ENST00000384254 107 ntBASIC3.53□□□□□ -1.84
TNFSF9P41273 SNORA48.2-201ENST00000390926 124 ntBASIC3.53□□□□□ -1.84
TNFSF9P41273 NDUFB4P4-201ENST00000404822 243 ntBASIC3.53□□□□□ -1.84
TNFSF9P41273 MIR1303-201ENST00000408625 86 ntBASIC3.53□□□□□ -1.84
TNFSF9P41273 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.53□□□□□ -1.84
TNFSF9P41273 AL365396.1-201ENST00000430854 671 ntBASIC3.53□□□□□ -1.84
TNFSF9P41273 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.53□□□□□ -1.84
TNFSF9P41273 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.53□□□□□ -1.84
TNFSF9P41273 ARL5AP2-201ENST00000444698 533 ntBASIC3.53□□□□□ -1.84
TNFSF9P41273 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.53□□□□□ -1.84
TNFSF9P41273 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.53□□□□□ -1.84
TNFSF9P41273 RPL5P24-201ENST00000463742 885 ntBASIC3.53□□□□□ -1.84
TNFSF9P41273 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.53□□□□□ -1.84
TNFSF9P41273 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.53□□□□□ -1.84
TNFSF9P41273 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.53□□□□□ -1.84
TNFSF9P41273 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.53□□□□□ -1.84
TNFSF9P41273 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.53□□□□□ -1.84
TNFSF9P41273 AC025260.1-201ENST00000548858 430 ntBASIC3.53□□□□□ -1.84
TNFSF9P41273 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.53□□□□□ -1.84
TNFSF9P41273 AC007424.1-203ENST00000554613 687 ntBASIC3.53□□□□□ -1.84
TNFSF9P41273 AC067805.1-201ENST00000559344 470 ntBASIC3.53□□□□□ -1.84
TNFSF9P41273 MIR2682-201ENST00000580305 110 ntBASIC3.53□□□□□ -1.84
TNFSF9P41273 VN1R92P-201ENST00000598511 928 ntBASIC3.53□□□□□ -1.84
TNFSF9P41273 YPEL5P2-201ENST00000605553 359 ntBASIC3.53□□□□□ -1.84
TNFSF9P41273 AC100793.4-201ENST00000613683 429 ntBASIC3.53□□□□□ -1.84
TNFSF9P41273 AC018816.2-201ENST00000621460 353 ntBASIC3.53□□□□□ -1.84
TNFSF9P41273 AC024023.1-201ENST00000624530 922 ntBASIC3.53□□□□□ -1.84
TNFSF9P41273 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TNFSF9P41273 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TNFSF9P41273 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TNFSF9P41273 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
TNFSF9P41273 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
TNFSF9P41273 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.53□□□□□ -1.85
TNFSF9P41273 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
TNFSF9P41273 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TNFSF9P41273 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.52□□□□□ -1.85
TNFSF9P41273 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.52□□□□□ -1.85
TNFSF9P41273 AC007390.2-201ENST00000606229 3803 ntBASIC3.52□□□□□ -1.85
TNFSF9P41273 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.52□□□□□ -1.85
TNFSF9P41273 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
TNFSF9P41273 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TNFSF9P41273 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.52□□□□□ -1.85
TNFSF9P41273 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.52□□□□□ -1.85
TNFSF9P41273 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.52□□□□□ -1.85
TNFSF9P41273 HMGB1P13-201ENST00000406019 642 ntBASIC3.52□□□□□ -1.85
TNFSF9P41273 RNU6-55P-201ENST00000411092 107 ntBASIC3.52□□□□□ -1.85
TNFSF9P41273 RNU6-954P-201ENST00000411355 107 ntBASIC3.52□□□□□ -1.85
TNFSF9P41273 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.52□□□□□ -1.85
TNFSF9P41273 AC012065.2-201ENST00000421295 375 ntBASIC3.52□□□□□ -1.85
TNFSF9P41273 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.52□□□□□ -1.85
TNFSF9P41273 AC008065.1-201ENST00000428525 348 ntBASIC3.52□□□□□ -1.85
TNFSF9P41273 RPS26P40-201ENST00000435209 294 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms