Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXA13P31271 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXA13P31271 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HOXA13P31271 OR6C71P-202ENST00000641886 1107 ntBASIC4.38□□□□□ -1.71
HOXA13P31271 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA13P31271 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA13P31271 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HOXA13P31271 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA13P31271 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA13P31271 Z73965.1-201ENST00000623412 2297 ntBASIC4.38□□□□□ -1.71
HOXA13P31271 AC027290.2-201ENST00000623210 18662 ntBASIC4.38□□□□□ -1.71
HOXA13P31271 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
HOXA13P31271 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HOXA13P31271 ZNF285B-201ENST00000561698 1767 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXA13P31271 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXA13P31271 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HOXA13P31271 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXA13P31271 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXA13P31271 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXA13P31271 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
HOXA13P31271 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
HOXA13P31271 NACA3P-201ENST00000359690 648 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 RNU6-582P-201ENST00000362989 107 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HOXA13P31271 MIR670-201ENST00000390142 98 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 AL136310.1-201ENST00000404926 654 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 RPS15AP40-201ENST00000419621 391 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXA13P31271 AL389915.1-201ENST00000422463 466 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXA13P31271 RPP40P1-201ENST00000426762 456 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.37□□□□□ -1.71
HOXA13P31271 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXA13P31271 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXA13P31271 KCTD9P3-201ENST00000434597 1169 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.37□□□□□ -1.71
HOXA13P31271 AL589880.1-201ENST00000448271 287 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 COX6CP18-201ENST00000448769 222 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXA13P31271 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXA13P31271 HMGN3P1-201ENST00000453847 193 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXA13P31271 NF1P3-201ENST00000457709 450 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 RPL23AP44-201ENST00000482216 473 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 AP002812.1-201ENST00000495378 474 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXA13P31271 AC090071.1-201ENST00000507713 644 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 RN7SKP82-201ENST00000516786 223 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 RNA5SP135-201ENST00000517019 125 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXA13P31271 PTP4A1P6-201ENST00000531034 478 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 OR8K4P-201ENST00000534608 872 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.37□□□□□ -1.71
HOXA13P31271 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXA13P31271 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXA13P31271 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXA13P31271 AC244505.7-201ENST00000599675 272 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 AL450336.1-201ENST00000605180 586 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 AL121895.2-201ENST00000619558 447 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 AC048344.4-201ENST00000619744 527 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 AP006248.2-201ENST00000623309 592 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 OR8B1P-202ENST00000641132 1178 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 LINC02211-204ENST00000642024 1070 ntBASIC4.37□□□□□ -1.71
HOXA13P31271 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
HOXA13P31271 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
HOXA13P31271 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXA13P31271 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXA13P31271 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXA13P31271 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXA13P31271 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXA13P31271 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXA13P31271 RNU6-115P-201ENST00000364310 107 ntBASIC4.36□□□□□ -1.71
HOXA13P31271 snoZ40.1-201ENST00000364540 72 ntBASIC4.36□□□□□ -1.71
HOXA13P31271 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HOXA13P31271 SOD2P1-201ENST00000396543 562 ntBASIC4.36□□□□□ -1.71
HOXA13P31271 AL139098.1-201ENST00000407291 389 ntBASIC4.36□□□□□ -1.71
HOXA13P31271 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.36□□□□□ -1.71
HOXA13P31271 EIF4EP1-201ENST00000422311 642 ntBASIC4.36□□□□□ -1.71
HOXA13P31271 AC233981.1-201ENST00000423224 461 ntBASIC4.36□□□□□ -1.71
HOXA13P31271 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.36□□□□□ -1.71
HOXA13P31271 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXA13P31271 MTND2P5-201ENST00000432656 1006 ntBASIC4.36□□□□□ -1.71
HOXA13P31271 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXA13P31271 ELOCP18-201ENST00000434209 337 ntBASIC4.36□□□□□ -1.71
HOXA13P31271 NANOGP2-201ENST00000435391 727 ntBASIC4.36□□□□□ -1.71
HOXA13P31271 AC093155.1-201ENST00000440164 826 ntBASIC4.36□□□□□ -1.71
HOXA13P31271 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXA13P31271 AC079776.3-201ENST00000450665 370 ntBASIC4.36□□□□□ -1.71
HOXA13P31271 UBDP1-202ENST00000457888 382 ntBASIC4.36□□□□□ -1.71
HOXA13P31271 AC068587.2-201ENST00000478386 781 ntBASIC4.36□□□□□ -1.71
HOXA13P31271 VPS26AP1-201ENST00000483197 979 ntBASIC4.36□□□□□ -1.71
HOXA13P31271 AC134050.1-201ENST00000495088 933 ntBASIC4.36□□□□□ -1.71
HOXA13P31271 SLC25A15P5-201ENST00000508033 253 ntBASIC4.36□□□□□ -1.71
HOXA13P31271 AC026726.1-201ENST00000512859 601 ntBASIC4.36□□□□□ -1.71
HOXA13P31271 RNA5SP208-201ENST00000516156 78 ntBASIC4.36□□□□□ -1.71
HOXA13P31271 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXA13P31271 AC074029.1-201ENST00000552531 1044 ntBASIC4.36□□□□□ -1.71
HOXA13P31271 GTF2IP22-201ENST00000554443 182 ntBASIC4.36□□□□□ -1.71
HOXA13P31271 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms