Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.57□□□□□ -1.68
CLIP1P30622 AC093831.2-201ENST00000624393 3427 ntBASIC4.57□□□□□ -1.68
CLIP1P30622 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLIP1P30622 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLIP1P30622 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CLIP1P30622 RPL31P1-201ENST00000398116 372 ntBASIC4.56□□□□□ -1.68
CLIP1P30622 RN7SKP222-201ENST00000410651 315 ntBASIC4.56□□□□□ -1.68
CLIP1P30622 B3GNT2P1-201ENST00000434960 952 ntBASIC4.56□□□□□ -1.68
CLIP1P30622 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.56□□□□□ -1.68
CLIP1P30622 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.56□□□□□ -1.68
CLIP1P30622 AC068657.1-201ENST00000520807 306 ntBASIC4.56□□□□□ -1.68
CLIP1P30622 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.56□□□□□ -1.68
CLIP1P30622 HMGB1P6-201ENST00000569046 646 ntBASIC4.56□□□□□ -1.68
CLIP1P30622 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLIP1P30622 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.56□□□□□ -1.68
CLIP1P30622 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLIP1P30622 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CLIP1P30622 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.56□□□□□ -1.68
CLIP1P30622 AC092111.2-201ENST00000611627 1414 ntBASIC4.56□□□□□ -1.68
CLIP1P30622 RN7SKP284-201ENST00000411002 343 ntBASIC4.55□□□□□ -1.68
CLIP1P30622 RPL21P40-201ENST00000428586 483 ntBASIC4.55□□□□□ -1.68
CLIP1P30622 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.55□□□□□ -1.68
CLIP1P30622 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.55□□□□□ -1.68
CLIP1P30622 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.55□□□□□ -1.68
CLIP1P30622 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.55□□□□□ -1.68
CLIP1P30622 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.55□□□□□ -1.68
CLIP1P30622 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.55□□□□□ -1.68
CLIP1P30622 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CLIP1P30622 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLIP1P30622 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
CLIP1P30622 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CLIP1P30622 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLIP1P30622 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLIP1P30622 AC073508.1-201ENST00000428866 656 ntBASIC4.55□□□□□ -1.68
CLIP1P30622 AC087499.2-201ENST00000432861 149 ntBASIC4.55□□□□□ -1.68
CLIP1P30622 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.55□□□□□ -1.68
CLIP1P30622 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.55□□□□□ -1.68
CLIP1P30622 NPM1P13-201ENST00000452663 865 ntBASIC4.55□□□□□ -1.68
CLIP1P30622 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.55□□□□□ -1.68
CLIP1P30622 AC138761.3-201ENST00000579993 334 ntBASIC4.55□□□□□ -1.68
CLIP1P30622 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.55□□□□□ -1.68
CLIP1P30622 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC4.54□□□□□ -1.68
CLIP1P30622 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLIP1P30622 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.54□□□□□ -1.68
CLIP1P30622 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.54□□□□□ -1.68
CLIP1P30622 AL031679.1-201ENST00000400616 525 ntBASIC4.54□□□□□ -1.68
CLIP1P30622 AL603766.1-201ENST00000407763 664 ntBASIC4.54□□□□□ -1.68
CLIP1P30622 AC063976.3-201ENST00000426849 329 ntBASIC4.54□□□□□ -1.68
CLIP1P30622 RAB28P3-201ENST00000448325 597 ntBASIC4.54□□□□□ -1.68
CLIP1P30622 AC108938.1-201ENST00000451204 136 ntBASIC4.54□□□□□ -1.68
CLIP1P30622 RPL21P41-201ENST00000459863 264 ntBASIC4.54□□□□□ -1.68
CLIP1P30622 AL035404.1-201ENST00000497982 568 ntBASIC4.54□□□□□ -1.68
CLIP1P30622 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLIP1P30622 RFPL4AP3-201ENST00000515267 345 ntBASIC4.54□□□□□ -1.68
CLIP1P30622 RN7SKP43-201ENST00000516173 320 ntBASIC4.54□□□□□ -1.68
CLIP1P30622 snoU109.6-201ENST00000516831 118 ntBASIC4.54□□□□□ -1.68
CLIP1P30622 NRBF2P5-201ENST00000603087 788 ntBASIC4.54□□□□□ -1.68
CLIP1P30622 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.54□□□□□ -1.68
CLIP1P30622 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CLIP1P30622 AL359693.1-201ENST00000614959 2407 ntBASIC4.53□□□□□ -1.68
CLIP1P30622 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLIP1P30622 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CLIP1P30622 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLIP1P30622 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLIP1P30622 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLIP1P30622 ASNSP1-201ENST00000518311 1939 ntBASIC4.53□□□□□ -1.68
CLIP1P30622 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLIP1P30622 RPL21P3-201ENST00000395517 478 ntBASIC4.53□□□□□ -1.68
CLIP1P30622 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.53□□□□□ -1.68
CLIP1P30622 AC146507.2-201ENST00000460608 476 ntBASIC4.53□□□□□ -1.68
CLIP1P30622 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.53□□□□□ -1.68
CLIP1P30622 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.53□□□□□ -1.68
CLIP1P30622 AP001025.2-201ENST00000490908 477 ntBASIC4.53□□□□□ -1.68
CLIP1P30622 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
CLIP1P30622 TXNP6-201ENST00000510190 310 ntBASIC4.53□□□□□ -1.68
CLIP1P30622 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.53□□□□□ -1.68
CLIP1P30622 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.53□□□□□ -1.68
CLIP1P30622 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.53□□□□□ -1.68
CLIP1P30622 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLIP1P30622 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLIP1P30622 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLIP1P30622 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLIP1P30622 AC007336.1-201ENST00000576365 3828 ntBASIC4.52□□□□□ -1.69
CLIP1P30622 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLIP1P30622 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLIP1P30622 MIR148B-201ENST00000362252 99 ntBASIC4.52□□□□□ -1.69
CLIP1P30622 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLIP1P30622 SNORA70E-201ENST00000384492 135 ntBASIC4.52□□□□□ -1.69
CLIP1P30622 PTP4A1P3-201ENST00000433661 420 ntBASIC4.52□□□□□ -1.69
CLIP1P30622 RPL23AP14-201ENST00000468281 468 ntBASIC4.52□□□□□ -1.69
CLIP1P30622 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.52□□□□□ -1.69
CLIP1P30622 RN7SL432P-201ENST00000484057 298 ntBASIC4.52□□□□□ -1.69
CLIP1P30622 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.52□□□□□ -1.69
CLIP1P30622 AC117522.3-201ENST00000507974 584 ntBASIC4.52□□□□□ -1.69
CLIP1P30622 AC034159.1-201ENST00000513885 583 ntBASIC4.52□□□□□ -1.69
CLIP1P30622 AC231759.1-201ENST00000616455 597 ntBASIC4.52□□□□□ -1.69
CLIP1P30622 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CLIP1P30622 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLIP1P30622 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLIP1P30622 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms