Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.19□□□□□ -1.9
UBCP0CG48 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
UBCP0CG48 AL121657.1-201ENST00000327215 531 ntBASIC3.19□□□□□ -1.9
UBCP0CG48 RNU6-374P-201ENST00000364146 108 ntBASIC3.19□□□□□ -1.9
UBCP0CG48 RNA5SP235-201ENST00000365411 114 ntBASIC3.19□□□□□ -1.9
UBCP0CG48 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
UBCP0CG48 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.19□□□□□ -1.9
UBCP0CG48 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
UBCP0CG48 FABP12P1-201ENST00000401911 322 ntBASIC3.19□□□□□ -1.9
UBCP0CG48 AL136116.1-201ENST00000403591 381 ntBASIC3.19□□□□□ -1.9
UBCP0CG48 AC017079.2-201ENST00000416102 485 ntBASIC3.19□□□□□ -1.9
UBCP0CG48 AC008280.1-201ENST00000418851 412 ntBASIC3.19□□□□□ -1.9
UBCP0CG48 RPL17P36-201ENST00000420302 549 ntBASIC3.19□□□□□ -1.9
UBCP0CG48 RAB11AP1-201ENST00000442978 646 ntBASIC3.19□□□□□ -1.9
UBCP0CG48 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
UBCP0CG48 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.19□□□□□ -1.9
UBCP0CG48 NPM1P13-201ENST00000452663 865 ntBASIC3.19□□□□□ -1.9
UBCP0CG48 RPS24P6-201ENST00000452670 400 ntBASIC3.19□□□□□ -1.9
UBCP0CG48 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.19□□□□□ -1.9
UBCP0CG48 AC010401.1-201ENST00000463867 348 ntBASIC3.19□□□□□ -1.9
UBCP0CG48 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
UBCP0CG48 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.19□□□□□ -1.9
UBCP0CG48 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.19□□□□□ -1.9
UBCP0CG48 AC005726.1-201ENST00000494679 427 ntBASIC3.19□□□□□ -1.9
UBCP0CG48 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.19□□□□□ -1.9
UBCP0CG48 TXNP6-201ENST00000510190 310 ntBASIC3.19□□□□□ -1.9
UBCP0CG48 RNU6-579P-201ENST00000516879 102 ntBASIC3.19□□□□□ -1.9
UBCP0CG48 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.19□□□□□ -1.9
UBCP0CG48 IGHV3-76-201ENST00000522465 295 ntBASIC3.19□□□□□ -1.9
UBCP0CG48 AP001636.2-201ENST00000525517 696 ntBASIC3.19□□□□□ -1.9
UBCP0CG48 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.19□□□□□ -1.9
UBCP0CG48 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.19□□□□□ -1.9
UBCP0CG48 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.19□□□□□ -1.9
UBCP0CG48 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.19□□□□□ -1.9
UBCP0CG48 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.19□□□□□ -1.9
UBCP0CG48 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.19□□□□□ -1.9
UBCP0CG48 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.19□□□□□ -1.9
UBCP0CG48 VN1R88P-201ENST00000596787 292 ntBASIC3.19□□□□□ -1.9
UBCP0CG48 AC113368.1-201ENST00000603736 382 ntBASIC3.19□□□□□ -1.9
UBCP0CG48 AC079880.2-201ENST00000603790 1213 ntBASIC3.19□□□□□ -1.9
UBCP0CG48 AC011816.2-201ENST00000607089 556 ntBASIC3.19□□□□□ -1.9
UBCP0CG48 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.19□□□□□ -1.9
UBCP0CG48 AC005344.1-201ENST00000613391 459 ntBASIC3.19□□□□□ -1.9
UBCP0CG48 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
UBCP0CG48 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.19□□□□□ -1.9
UBCP0CG48 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.19□□□□□ -1.9
UBCP0CG48 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
UBCP0CG48 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
UBCP0CG48 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
UBCP0CG48 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
UBCP0CG48 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
UBCP0CG48 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
UBCP0CG48 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
UBCP0CG48 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.19□□□□□ -1.9
UBCP0CG48 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.19□□□□□ -1.9
UBCP0CG48 AL355578.1-201ENST00000607405 1328 ntBASIC3.19□□□□□ -1.9
UBCP0CG48 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.18□□□□□ -1.9
UBCP0CG48 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UBCP0CG48 AC092326.2-201ENST00000624772 1561 ntBASIC3.18□□□□□ -1.9
UBCP0CG48 AP004289.2-201ENST00000444413 1457 ntBASIC3.18□□□□□ -1.9
UBCP0CG48 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UBCP0CG48 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
UBCP0CG48 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UBCP0CG48 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UBCP0CG48 RNA5SP42-201ENST00000364278 115 ntBASIC3.18□□□□□ -1.9
UBCP0CG48 RNU6-1226P-201ENST00000384317 107 ntBASIC3.18□□□□□ -1.9
UBCP0CG48 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
UBCP0CG48 MIR937-201ENST00000401271 86 ntBASIC3.18□□□□□ -1.9
UBCP0CG48 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UBCP0CG48 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.18□□□□□ -1.9
UBCP0CG48 OR8F1P-201ENST00000425243 930 ntBASIC3.18□□□□□ -1.9
UBCP0CG48 AL591419.1-201ENST00000427423 339 ntBASIC3.18□□□□□ -1.9
UBCP0CG48 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.18□□□□□ -1.9
UBCP0CG48 AL158071.1-201ENST00000430315 461 ntBASIC3.18□□□□□ -1.9
UBCP0CG48 RPL21P110-201ENST00000433345 446 ntBASIC3.18□□□□□ -1.9
UBCP0CG48 PTP4A1P3-201ENST00000433661 420 ntBASIC3.18□□□□□ -1.9
UBCP0CG48 AC010881.1-201ENST00000433830 235 ntBASIC3.18□□□□□ -1.9
UBCP0CG48 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.18□□□□□ -1.9
UBCP0CG48 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.18□□□□□ -1.9
UBCP0CG48 AL034418.1-201ENST00000448675 860 ntBASIC3.18□□□□□ -1.9
UBCP0CG48 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.18□□□□□ -1.9
UBCP0CG48 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.18□□□□□ -1.9
UBCP0CG48 RPS15AP1-201ENST00000457423 391 ntBASIC3.18□□□□□ -1.9
UBCP0CG48 U3.44-201ENST00000458938 192 ntBASIC3.18□□□□□ -1.9
UBCP0CG48 RPS27P29-201ENST00000463110 252 ntBASIC3.18□□□□□ -1.9
UBCP0CG48 AP002884.2-201ENST00000471647 395 ntBASIC3.18□□□□□ -1.9
UBCP0CG48 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.18□□□□□ -1.9
UBCP0CG48 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UBCP0CG48 AC110768.1-201ENST00000509222 400 ntBASIC3.18□□□□□ -1.9
UBCP0CG48 RNU2-27P-201ENST00000516185 142 ntBASIC3.18□□□□□ -1.9
UBCP0CG48 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.18□□□□□ -1.9
UBCP0CG48 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.18□□□□□ -1.9
UBCP0CG48 AC092470.1-201ENST00000546187 132 ntBASIC3.18□□□□□ -1.9
UBCP0CG48 AC010198.2-201ENST00000550612 259 ntBASIC3.18□□□□□ -1.9
UBCP0CG48 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UBCP0CG48 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.18□□□□□ -1.9
UBCP0CG48 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UBCP0CG48 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.18□□□□□ -1.9
UBCP0CG48 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UBCP0CG48 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 157.9 ms