Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RPL23AP57-201ENST00000332361 466 ntBASIC3.57□□□□□ -1.84
CTDNEP1O95476 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CTDNEP1O95476 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CTDNEP1O95476 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.57□□□□□ -1.84
CTDNEP1O95476 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.57□□□□□ -1.84
CTDNEP1O95476 RN7SKP27-201ENST00000410684 333 ntBASIC3.57□□□□□ -1.84
CTDNEP1O95476 AC092832.1-201ENST00000422934 400 ntBASIC3.57□□□□□ -1.84
CTDNEP1O95476 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CTDNEP1O95476 RPL23AP69-201ENST00000431134 458 ntBASIC3.57□□□□□ -1.84
CTDNEP1O95476 TRIM60P13-201ENST00000432350 1283 ntBASIC3.57□□□□□ -1.84
CTDNEP1O95476 RSL24D1P8-201ENST00000434442 492 ntBASIC3.57□□□□□ -1.84
CTDNEP1O95476 FTH1P1-201ENST00000437933 532 ntBASIC3.57□□□□□ -1.84
CTDNEP1O95476 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CTDNEP1O95476 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.57□□□□□ -1.84
CTDNEP1O95476 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.57□□□□□ -1.84
CTDNEP1O95476 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.57□□□□□ -1.84
CTDNEP1O95476 AC098799.1-201ENST00000504752 800 ntBASIC3.57□□□□□ -1.84
CTDNEP1O95476 NDUFB4P9-201ENST00000511646 388 ntBASIC3.57□□□□□ -1.84
CTDNEP1O95476 AC117525.1-201ENST00000515228 503 ntBASIC3.57□□□□□ -1.84
CTDNEP1O95476 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.57□□□□□ -1.84
CTDNEP1O95476 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.57□□□□□ -1.84
CTDNEP1O95476 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.57□□□□□ -1.84
CTDNEP1O95476 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.57□□□□□ -1.84
CTDNEP1O95476 AC005242.1-201ENST00000585658 438 ntBASIC3.57□□□□□ -1.84
CTDNEP1O95476 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.57□□□□□ -1.84
CTDNEP1O95476 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.57□□□□□ -1.84
CTDNEP1O95476 AC019080.5-201ENST00000624891 757 ntBASIC3.57□□□□□ -1.84
CTDNEP1O95476 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
CTDNEP1O95476 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.57□□□□□ -1.84
CTDNEP1O95476 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CTDNEP1O95476 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.56□□□□□ -1.84
CTDNEP1O95476 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CTDNEP1O95476 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CTDNEP1O95476 AC024341.1-201ENST00000526444 1552 ntBASIC3.56□□□□□ -1.84
CTDNEP1O95476 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CTDNEP1O95476 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CTDNEP1O95476 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CTDNEP1O95476 MTND3P20-201ENST00000407663 186 ntBASIC3.56□□□□□ -1.84
CTDNEP1O95476 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.56□□□□□ -1.84
CTDNEP1O95476 AC245054.2-201ENST00000415639 319 ntBASIC3.56□□□□□ -1.84
CTDNEP1O95476 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.56□□□□□ -1.84
CTDNEP1O95476 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.56□□□□□ -1.84
CTDNEP1O95476 RN7SL601P-201ENST00000471221 293 ntBASIC3.56□□□□□ -1.84
CTDNEP1O95476 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.56□□□□□ -1.84
CTDNEP1O95476 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.56□□□□□ -1.84
CTDNEP1O95476 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.56□□□□□ -1.84
CTDNEP1O95476 MIR5004-201ENST00000579078 107 ntBASIC3.56□□□□□ -1.84
CTDNEP1O95476 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.56□□□□□ -1.84
CTDNEP1O95476 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.56□□□□□ -1.84
CTDNEP1O95476 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.56□□□□□ -1.84
CTDNEP1O95476 AC022146.1-201ENST00000595307 847 ntBASIC3.56□□□□□ -1.84
CTDNEP1O95476 AC073111.2-201ENST00000605657 1075 ntBASIC3.56□□□□□ -1.84
CTDNEP1O95476 AC009032.1-201ENST00000617574 431 ntBASIC3.56□□□□□ -1.84
CTDNEP1O95476 MIR622-201ENST00000638396 96 ntBASIC3.56□□□□□ -1.84
CTDNEP1O95476 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.56□□□□□ -1.84
CTDNEP1O95476 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CTDNEP1O95476 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CTDNEP1O95476 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CTDNEP1O95476 SNORA63.1-201ENST00000362493 131 ntBASIC3.55□□□□□ -1.84
CTDNEP1O95476 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CTDNEP1O95476 MIR7-3-201ENST00000384898 110 ntBASIC3.55□□□□□ -1.84
CTDNEP1O95476 MIR320B1-201ENST00000390209 79 ntBASIC3.55□□□□□ -1.84
CTDNEP1O95476 TAF9BP1-201ENST00000396646 746 ntBASIC3.55□□□□□ -1.84
CTDNEP1O95476 SNORA11-201ENST00000408789 128 ntBASIC3.55□□□□□ -1.84
CTDNEP1O95476 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.55□□□□□ -1.84
CTDNEP1O95476 MTCO1P45-201ENST00000431457 267 ntBASIC3.55□□□□□ -1.84
CTDNEP1O95476 AC011242.1-201ENST00000433596 1158 ntBASIC3.55□□□□□ -1.84
CTDNEP1O95476 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.55□□□□□ -1.84
CTDNEP1O95476 UQCRHP3-201ENST00000451503 251 ntBASIC3.55□□□□□ -1.84
CTDNEP1O95476 AL513343.1-201ENST00000451818 792 ntBASIC3.55□□□□□ -1.84
CTDNEP1O95476 PRSS3P4-201ENST00000453323 162 ntBASIC3.55□□□□□ -1.84
CTDNEP1O95476 HMGN2P7-201ENST00000456186 273 ntBASIC3.55□□□□□ -1.84
CTDNEP1O95476 AL136097.1-201ENST00000456945 913 ntBASIC3.55□□□□□ -1.84
CTDNEP1O95476 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.55□□□□□ -1.84
CTDNEP1O95476 AC012170.1-201ENST00000495139 359 ntBASIC3.55□□□□□ -1.84
CTDNEP1O95476 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CTDNEP1O95476 AL358832.1-201ENST00000497800 389 ntBASIC3.55□□□□□ -1.84
CTDNEP1O95476 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.55□□□□□ -1.84
CTDNEP1O95476 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.55□□□□□ -1.84
CTDNEP1O95476 PDCL2P2-201ENST00000533651 189 ntBASIC3.55□□□□□ -1.84
CTDNEP1O95476 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.55□□□□□ -1.84
CTDNEP1O95476 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.55□□□□□ -1.84
CTDNEP1O95476 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.55□□□□□ -1.84
CTDNEP1O95476 AL031985.2-201ENST00000600955 480 ntBASIC3.55□□□□□ -1.84
CTDNEP1O95476 AL450489.1-201ENST00000612071 468 ntBASIC3.55□□□□□ -1.84
CTDNEP1O95476 uc_338.9-201ENST00000617424 182 ntBASIC3.55□□□□□ -1.84
CTDNEP1O95476 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.55□□□□□ -1.84
CTDNEP1O95476 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CTDNEP1O95476 AC138393.1-206ENST00000540997 1886 ntBASIC3.55□□□□□ -1.84
CTDNEP1O95476 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CTDNEP1O95476 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
CTDNEP1O95476 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.55□□□□□ -1.84
CTDNEP1O95476 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.55□□□□□ -1.84
CTDNEP1O95476 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CTDNEP1O95476 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.54□□□□□ -1.84
CTDNEP1O95476 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CTDNEP1O95476 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.54□□□□□ -1.84
CTDNEP1O95476 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.54□□□□□ -1.84
CTDNEP1O95476 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CTDNEP1O95476 SNORA70E-201ENST00000384492 135 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms