Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RNF40O75150 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF40O75150 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF40O75150 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.3
RNF40O75150 AC008669.1-201ENST00000565823 2178 ntBASIC6.96□□□□□ -1.3
RNF40O75150 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
RNF40O75150 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RNF40O75150 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
RNF40O75150 AC005332.9-201ENST00000620266 2921 ntBASIC6.96□□□□□ -1.3
RNF40O75150 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RNF40O75150 PABPC1P7-201ENST00000413177 1513 ntBASIC6.96□□□□□ -1.3
RNF40O75150 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF40O75150 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RNF40O75150 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RNF40O75150 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF40O75150 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF40O75150 AC103710.2-202ENST00000641454 2853 ntBASIC6.95□□□□□ -1.3
RNF40O75150 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.95□□□□□ -1.3
RNF40O75150 NXPH1-205ENST00000602349 1953 ntBASIC6.95□□□□□ -1.3
RNF40O75150 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF40O75150 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF40O75150 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
RNF40O75150 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF40O75150 AC010329.1-201ENST00000593903 8328 ntBASIC6.95□□□□□ -1.3
RNF40O75150 Y_RNA.19-201ENST00000362462 99 ntBASIC6.95□□□□□ -1.3
RNF40O75150 SNORD35A-201ENST00000363389 86 ntBASIC6.95□□□□□ -1.3
RNF40O75150 RNA5SP140-201ENST00000364524 92 ntBASIC6.95□□□□□ -1.3
RNF40O75150 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.95□□□□□ -1.3
RNF40O75150 LCN1P2-201ENST00000372030 223 ntBASIC6.95□□□□□ -1.3
RNF40O75150 MRPS6P2-201ENST00000381143 370 ntBASIC6.95□□□□□ -1.3
RNF40O75150 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
RNF40O75150 RNU6-1140P-201ENST00000410517 106 ntBASIC6.95□□□□□ -1.3
RNF40O75150 AC096664.2-201ENST00000411843 406 ntBASIC6.95□□□□□ -1.3
RNF40O75150 AL133396.1-201ENST00000432048 687 ntBASIC6.95□□□□□ -1.3
RNF40O75150 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC6.95□□□□□ -1.3
RNF40O75150 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.95□□□□□ -1.3
RNF40O75150 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.95□□□□□ -1.3
RNF40O75150 RPL9P32-201ENST00000464118 620 ntBASIC6.95□□□□□ -1.3
RNF40O75150 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC6.95□□□□□ -1.3
RNF40O75150 AC021382.1-201ENST00000483523 359 ntBASIC6.95□□□□□ -1.3
RNF40O75150 RPS27P20-201ENST00000492051 246 ntBASIC6.95□□□□□ -1.3
RNF40O75150 AC026979.1-201ENST00000492525 396 ntBASIC6.95□□□□□ -1.3
RNF40O75150 AC083829.1-201ENST00000503756 657 ntBASIC6.95□□□□□ -1.3
RNF40O75150 AC105758.1-201ENST00000506038 399 ntBASIC6.95□□□□□ -1.3
RNF40O75150 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.95□□□□□ -1.3
RNF40O75150 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC6.95□□□□□ -1.3
RNF40O75150 AC005363.1-201ENST00000530779 351 ntBASIC6.95□□□□□ -1.3
RNF40O75150 AC140063.1-201ENST00000541343 259 ntBASIC6.95□□□□□ -1.3
RNF40O75150 AL049839.1-201ENST00000556151 657 ntBASIC6.95□□□□□ -1.3
RNF40O75150 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.95□□□□□ -1.3
RNF40O75150 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC6.95□□□□□ -1.3
RNF40O75150 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
RNF40O75150 RN7SL199P-201ENST00000578752 281 ntBASIC6.95□□□□□ -1.3
RNF40O75150 RN7SL656P-201ENST00000579044 281 ntBASIC6.95□□□□□ -1.3
RNF40O75150 RN7SL230P-201ENST00000580835 303 ntBASIC6.95□□□□□ -1.3
RNF40O75150 RN7SL404P-201ENST00000582421 281 ntBASIC6.95□□□□□ -1.3
RNF40O75150 MIR4420-201ENST00000583944 77 ntBASIC6.95□□□□□ -1.3
RNF40O75150 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.95□□□□□ -1.3
RNF40O75150 AC010620.2-201ENST00000600135 313 ntBASIC6.95□□□□□ -1.3
RNF40O75150 AC010900.2-201ENST00000604508 210 ntBASIC6.95□□□□□ -1.3
RNF40O75150 AL590032.1-201ENST00000604920 252 ntBASIC6.95□□□□□ -1.3
RNF40O75150 AL161423.1-201ENST00000613700 262 ntBASIC6.95□□□□□ -1.3
RNF40O75150 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.95□□□□□ -1.3
RNF40O75150 MIR6071-201ENST00000616741 78 ntBASIC6.95□□□□□ -1.3
RNF40O75150 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC6.95□□□□□ -1.3
RNF40O75150 AC073592.6-201ENST00000624271 415 ntBASIC6.95□□□□□ -1.3
RNF40O75150 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.95□□□□□ -1.3
RNF40O75150 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF40O75150 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RNF40O75150 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF40O75150 AL136984.1-201ENST00000607611 1893 ntBASIC6.95□□□□□ -1.3
RNF40O75150 AC027575.3-201ENST00000583058 2747 ntBASIC6.95□□□□□ -1.3
RNF40O75150 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RNF40O75150 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF40O75150 ZNF806-201ENST00000438300 1774 ntBASIC6.95□□□□□ -1.3
RNF40O75150 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF40O75150 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.95□□□□□ -1.3
RNF40O75150 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF40O75150 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.94□□□□□ -1.3
RNF40O75150 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RNF40O75150 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RNF40O75150 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RNF40O75150 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
RNF40O75150 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.94□□□□□ -1.3
RNF40O75150 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RNF40O75150 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RNF40O75150 SNORD62.1-201ENST00000362541 86 ntBASIC6.94□□□□□ -1.3
RNF40O75150 RNU6-212P-201ENST00000362642 104 ntBASIC6.94□□□□□ -1.3
RNF40O75150 RNU6-740P-201ENST00000364734 105 ntBASIC6.94□□□□□ -1.3
RNF40O75150 RNU6-1081P-201ENST00000384537 107 ntBASIC6.94□□□□□ -1.3
RNF40O75150 RNU6-306P-201ENST00000384617 107 ntBASIC6.94□□□□□ -1.3
RNF40O75150 MIR649-201ENST00000384843 97 ntBASIC6.94□□□□□ -1.3
RNF40O75150 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.94□□□□□ -1.3
RNF40O75150 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.94□□□□□ -1.3
RNF40O75150 RPL12P34-201ENST00000424532 479 ntBASIC6.94□□□□□ -1.3
RNF40O75150 AC079807.1-201ENST00000429993 481 ntBASIC6.94□□□□□ -1.3
RNF40O75150 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RNF40O75150 MYL8P-204ENST00000431574 518 ntBASIC6.94□□□□□ -1.3
RNF40O75150 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.94□□□□□ -1.3
RNF40O75150 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 227.7 ms