Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 SNRPGP3-201ENST00000469405 227 ntBASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 HAUS1P1-201ENST00000505275 832 ntBASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 OR5D17P-201ENST00000531492 978 ntBASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 CASP1-216ENST00000534497 825 ntTSL 5 BASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 HIGD1AP1-201ENST00000550979 275 ntBASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 RPL21P12-201ENST00000559810 515 ntBASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 CKS1BP3-201ENST00000600888 237 ntBASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 SNORA35B-201ENST00000607417 129 ntBASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 uc_338.1-201ENST00000612113 180 ntBASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 XIST_intron.1-201ENST00000619444 68 ntBASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.6□□□□□ -1.99
TCRBV4S1A1TA0A5B7 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AF127577.6-201ENST00000623352 2191 ntBASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 MIR148B-201ENST00000362252 99 ntBASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AC012498.1-201ENST00000424037 437 ntBASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 NPM1P24-201ENST00000428039 894 ntBASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AL512649.1-201ENST00000428997 581 ntBASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AC009969.1-201ENST00000438726 172 ntBASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 RPS29P2-201ENST00000479278 136 ntBASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 OR5H3P-201ENST00000502817 919 ntBASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AC021678.1-201ENST00000505195 936 ntBASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AC010285.3-201ENST00000511668 676 ntBASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 RNU1-143P-201ENST00000516296 146 ntBASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 SCARNA20.6-201ENST00000517251 106 ntBASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AC245166.1-201ENST00000521012 253 ntBASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AL049844.2-201ENST00000604280 628 ntBASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 U1.23-201ENST00000610293 146 ntBASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AL162274.2-201ENST00000614406 332 ntBASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 RNU1-68P-201ENST00000615382 146 ntBASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 MIR8057-201ENST00000620957 69 ntBASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 U1.39-201ENST00000621562 146 ntBASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 AC127502.3-201ENST00000636170 1206 ntBASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.59□□□□□ -1.99
TCRBV4S1A1TA0A5B7 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.59□□□□□ -2
TCRBV4S1A1TA0A5B7 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.59□□□□□ -2
TCRBV4S1A1TA0A5B7 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC2.59□□□□□ -2
TCRBV4S1A1TA0A5B7 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
TCRBV4S1A1TA0A5B7 AL356274.2-201ENST00000624379 3752 ntBASIC2.58□□□□□ -2
TCRBV4S1A1TA0A5B7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.58□□□□□ -2
TCRBV4S1A1TA0A5B7 AP001148.1-201ENST00000624124 2359 ntBASIC2.58□□□□□ -2
TCRBV4S1A1TA0A5B7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.58□□□□□ -2
TCRBV4S1A1TA0A5B7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
TCRBV4S1A1TA0A5B7 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.58□□□□□ -2
TCRBV4S1A1TA0A5B7 SNORA48.2-201ENST00000390926 124 ntBASIC2.58□□□□□ -2
TCRBV4S1A1TA0A5B7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.58□□□□□ -2
TCRBV4S1A1TA0A5B7 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.58□□□□□ -2
TCRBV4S1A1TA0A5B7 RPL30P3-201ENST00000424262 333 ntBASIC2.58□□□□□ -2
TCRBV4S1A1TA0A5B7 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.58□□□□□ -2
TCRBV4S1A1TA0A5B7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.58□□□□□ -2
TCRBV4S1A1TA0A5B7 TVP23BP2-201ENST00000455082 615 ntBASIC2.58□□□□□ -2
TCRBV4S1A1TA0A5B7 AC010683.1-201ENST00000473673 378 ntBASIC2.58□□□□□ -2
TCRBV4S1A1TA0A5B7 ST13P14-201ENST00000474095 734 ntBASIC2.58□□□□□ -2
TCRBV4S1A1TA0A5B7 TMED11P-201ENST00000479478 690 ntBASIC2.58□□□□□ -2
TCRBV4S1A1TA0A5B7 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC2.58□□□□□ -2
TCRBV4S1A1TA0A5B7 RN7SL504P-201ENST00000494496 287 ntBASIC2.58□□□□□ -2
TCRBV4S1A1TA0A5B7 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC2.58□□□□□ -2
TCRBV4S1A1TA0A5B7 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.58□□□□□ -2
TCRBV4S1A1TA0A5B7 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.58□□□□□ -2
TCRBV4S1A1TA0A5B7 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.58□□□□□ -2
TCRBV4S1A1TA0A5B7 IGHV3-76-201ENST00000522465 295 ntBASIC2.58□□□□□ -2
TCRBV4S1A1TA0A5B7 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.58□□□□□ -2
TCRBV4S1A1TA0A5B7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms