Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RAI2Q9Y5P3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.36□□□□□ -1.71
RAI2Q9Y5P3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RAI2Q9Y5P3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAI2Q9Y5P3 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.36□□□□□ -1.71
RAI2Q9Y5P3 AL158163.1-201ENST00000603915 1649 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 RNU6-1066P-201ENST00000363573 105 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 RNU6-553P-201ENST00000364047 96 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 RNU6-619P-201ENST00000365146 108 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 SNORD66.1-201ENST00000391230 76 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 RNU2-42P-201ENST00000410697 113 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 BOLA3P4-201ENST00000418151 400 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 AC092647.1-201ENST00000420654 287 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 AL022400.1-201ENST00000423946 935 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 RPL7P2-201ENST00000427639 268 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 AL035407.1-201ENST00000429211 571 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 DYNLL1P7-201ENST00000429273 258 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 ACTR3P2-201ENST00000439585 1257 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 AL512326.1-201ENST00000443050 721 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 MTCYBP3-201ENST00000445588 1137 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 AL354710.1-201ENST00000453641 246 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 PARP4P3-201ENST00000510265 317 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 RNA5SP135-201ENST00000517019 125 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 AC100770.1-201ENST00000532310 322 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 AC135628.1-201ENST00000568867 534 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 AC133552.5-201ENST00000604266 540 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 AL139418.1-201ENST00000613613 177 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 AC019278.1-201ENST00000623516 479 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 AC124312.6-202ENST00000623624 418 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 AP000526.1-201ENST00000603308 1388 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 DBF4P1-201ENST00000412976 1892 ntBASIC4.35□□□□□ -1.71
RAI2Q9Y5P3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AC027228.2-201ENST00000567141 2154 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AC067945.1-201ENST00000342609 618 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 RNU1-132P-201ENST00000364300 164 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 Y_RNA.311-201ENST00000365068 96 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 RNA5SP366-201ENST00000365454 123 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 MIR7-3-201ENST00000384898 110 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AL021407.1-201ENST00000404531 386 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 HDGFP1-201ENST00000405943 252 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AL133264.1-201ENST00000407157 562 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 RNU6ATAC-201ENST00000408749 126 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 TPT1P2-201ENST00000413105 503 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 RPL7P44-201ENST00000424827 742 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AL157831.1-201ENST00000426134 473 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AC073335.1-201ENST00000427776 363 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 MTCO3P5-201ENST00000433620 714 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 ELOCP8-201ENST00000439309 332 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 ELOCP15-201ENST00000442090 332 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 ABCF2P2-201ENST00000450549 296 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 MTND4LP3-201ENST00000468320 276 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AC092045.1-201ENST00000495716 1231 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 MTND5P13-201ENST00000513046 1079 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 RNU6-678P-201ENST00000516832 109 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms