Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 IGHV1-14-201ENST00000523391 241 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 AC005341.1-201ENST00000571086 708 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 PSMA6P4-201ENST00000603247 718 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 AC005191.1-201ENST00000603950 358 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 AC104695.3-201ENST00000604052 296 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 AC018889.1-201ENST00000605372 397 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 AC012443.1-201ENST00000605605 231 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 AL732372.2-225ENST00000642124 456 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB11Q9Y5F2 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 ZNF734P-201ENST00000419494 1534 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 RNA5SP391-201ENST00000363456 119 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 RNU6-188P-201ENST00000364207 107 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 Y_RNA.307-201ENST00000365022 117 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 RNU6-550P-201ENST00000391057 101 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 Y_RNA.645-201ENST00000391229 102 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 AC005522.1-201ENST00000395416 346 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 DBIP1-201ENST00000401435 260 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 NDUFS5P1-201ENST00000405668 289 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 RNU4-61P-201ENST00000411243 107 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 AC008267.5-201ENST00000424928 265 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 RSL24D1P6-201ENST00000426934 401 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 RPS15AP27-201ENST00000449183 343 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 AC104634.1-201ENST00000452720 462 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 AC068228.1-201ENST00000461723 211 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 RNU6-64P-201ENST00000517119 105 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 GNAI2P1-201ENST00000541815 315 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 TPRX1P1-201ENST00000557620 319 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 AC009229.3-201ENST00000608056 282 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 AC062037.2-201ENST00000610137 73 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 AL121612.2-201ENST00000612261 482 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 AC107871.2-201ENST00000612894 502 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 MIR6862-1-201ENST00000613016 70 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 AL096712.1-201ENST00000614561 159 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 MIR6862-2-201ENST00000614755 70 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 AL158163.1-201ENST00000603915 1649 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 CASC19-246ENST00000641625 1606 ntBASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB11Q9Y5F2 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 AC103710.2-202ENST00000641454 2853 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms