Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 AC021382.1-201ENST00000483523 359 ntBASIC1.29□□□□□ -2.2
MACF1Q9UPN3 AL731537.2-201ENST00000561565 951 ntBASIC1.29□□□□□ -2.2
MACF1Q9UPN3 CYP4A43P-201ENST00000568156 121 ntBASIC1.29□□□□□ -2.2
MACF1Q9UPN3 MIR1273D-201ENST00000577266 86 ntBASIC1.29□□□□□ -2.2
MACF1Q9UPN3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 AP004607.9-201ENST00000618202 316 ntBASIC1.29□□□□□ -2.2
MACF1Q9UPN3 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 RNA5SP62-201ENST00000363457 110 ntBASIC1.29□□□□□ -2.2
MACF1Q9UPN3 CYCSP45-201ENST00000402289 315 ntBASIC1.29□□□□□ -2.2
MACF1Q9UPN3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC1.29□□□□□ -2.2
MACF1Q9UPN3 AC008489.1-201ENST00000524271 483 ntBASIC1.29□□□□□ -2.2
MACF1Q9UPN3 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 AF117829.1-206ENST00000621883 3802 ntBASIC1.29□□□□□ -2.2
MACF1Q9UPN3 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 ELOCP13-201ENST00000443934 329 ntBASIC1.29□□□□□ -2.2
MACF1Q9UPN3 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 AC005840.1-201ENST00000498412 377 ntBASIC1.29□□□□□ -2.2
MACF1Q9UPN3 OR5H5P-201ENST00000503164 928 ntBASIC1.29□□□□□ -2.2
MACF1Q9UPN3 AP001317.1-201ENST00000531194 960 ntBASIC1.29□□□□□ -2.2
MACF1Q9UPN3 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 NRBF2P1-201ENST00000587407 859 ntBASIC1.29□□□□□ -2.2
MACF1Q9UPN3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 OR51A6P-201ENST00000418680 1004 ntBASIC1.29□□□□□ -2.2
MACF1Q9UPN3 AL162389.1-201ENST00000449233 177 ntBASIC1.29□□□□□ -2.2
MACF1Q9UPN3 AC111000.2-201ENST00000507775 550 ntBASIC1.29□□□□□ -2.2
MACF1Q9UPN3 AL359821.1-201ENST00000605519 182 ntBASIC1.29□□□□□ -2.2
MACF1Q9UPN3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC1.29□□□□□ -2.2
MACF1Q9UPN3 AL592437.2-201ENST00000421655 2434 ntBASIC1.29□□□□□ -2.2
MACF1Q9UPN3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 AL672167.1-204ENST00000641875 3017 ntBASIC1.28□□□□□ -2.2
MACF1Q9UPN3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 CD2-201ENST00000369477 478 ntTSL 2 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 AL512633.1-201ENST00000399931 655 ntBASIC1.28□□□□□ -2.2
MACF1Q9UPN3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 RPS27AP15-201ENST00000447672 466 ntBASIC1.28□□□□□ -2.2
MACF1Q9UPN3 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 AC009063.1-201ENST00000563342 702 ntBASIC1.28□□□□□ -2.2
MACF1Q9UPN3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 AC096638.2-201ENST00000434965 711 ntBASIC1.28□□□□□ -2.2
MACF1Q9UPN3 AC021087.2-201ENST00000504656 1203 ntBASIC1.28□□□□□ -2.2
MACF1Q9UPN3 RN7SKP96-201ENST00000516948 297 ntBASIC1.28□□□□□ -2.2
MACF1Q9UPN3 AC233280.2-201ENST00000603917 1070 ntBASIC1.28□□□□□ -2.2
MACF1Q9UPN3 AP004247.3-201ENST00000608682 624 ntBASIC1.28□□□□□ -2.2
MACF1Q9UPN3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 DDX10P1-201ENST00000448545 1933 ntBASIC1.28□□□□□ -2.2
MACF1Q9UPN3 AL022322.2-201ENST00000624072 20397 ntBASIC1.28□□□□□ -2.2
MACF1Q9UPN3 AC026241.1-201ENST00000517873 2142 ntBASIC1.28□□□□□ -2.2
MACF1Q9UPN3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 AC069540.1-201ENST00000446320 988 ntBASIC1.28□□□□□ -2.2
MACF1Q9UPN3 AC023598.1-201ENST00000472521 361 ntBASIC1.28□□□□□ -2.2
MACF1Q9UPN3 UBA52P3-201ENST00000491303 382 ntBASIC1.28□□□□□ -2.2
MACF1Q9UPN3 RN7SKP219-201ENST00000516825 296 ntBASIC1.28□□□□□ -2.2
MACF1Q9UPN3 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms