Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AL035423.1-201ENST00000420331 213 ntBASIC3.2□□□□□ -1.9
VAPAQ9P0L0 ETF1P3-201ENST00000430422 1160 ntBASIC3.2□□□□□ -1.9
VAPAQ9P0L0 RPL23AP22-201ENST00000437556 453 ntBASIC3.2□□□□□ -1.9
VAPAQ9P0L0 AC097499.1-201ENST00000444277 208 ntBASIC3.2□□□□□ -1.9
VAPAQ9P0L0 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.2□□□□□ -1.9
VAPAQ9P0L0 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.2□□□□□ -1.9
VAPAQ9P0L0 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.2□□□□□ -1.9
VAPAQ9P0L0 XKRYP5-201ENST00000449659 483 ntBASIC3.2□□□□□ -1.9
VAPAQ9P0L0 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.2□□□□□ -1.9
VAPAQ9P0L0 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.2□□□□□ -1.9
VAPAQ9P0L0 NPM1P41-201ENST00000512920 831 ntBASIC3.2□□□□□ -1.9
VAPAQ9P0L0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.2□□□□□ -1.9
VAPAQ9P0L0 RN7SKP289-201ENST00000517244 295 ntBASIC3.2□□□□□ -1.9
VAPAQ9P0L0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.2□□□□□ -1.9
VAPAQ9P0L0 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VAPAQ9P0L0 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.2□□□□□ -1.9
VAPAQ9P0L0 AC139103.1-201ENST00000534696 1030 ntBASIC3.2□□□□□ -1.9
VAPAQ9P0L0 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.2□□□□□ -1.9
VAPAQ9P0L0 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.2□□□□□ -1.9
VAPAQ9P0L0 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.2□□□□□ -1.9
VAPAQ9P0L0 CBX3P2-202ENST00000583365 535 ntBASIC3.2□□□□□ -1.9
VAPAQ9P0L0 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.2□□□□□ -1.9
VAPAQ9P0L0 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.2□□□□□ -1.9
VAPAQ9P0L0 AC010591.1-201ENST00000603941 649 ntBASIC3.2□□□□□ -1.9
VAPAQ9P0L0 AC011468.4-201ENST00000603942 409 ntBASIC3.2□□□□□ -1.9
VAPAQ9P0L0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.2□□□□□ -1.9
VAPAQ9P0L0 XPOTP1-201ENST00000443317 2398 ntBASIC3.2□□□□□ -1.9
VAPAQ9P0L0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.2□□□□□ -1.9
VAPAQ9P0L0 AC007342.9-201ENST00000623877 1385 ntBASIC3.2□□□□□ -1.9
VAPAQ9P0L0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.2□□□□□ -1.9
VAPAQ9P0L0 SRP72P2-201ENST00000344851 1979 ntBASIC3.2□□□□□ -1.9
VAPAQ9P0L0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
VAPAQ9P0L0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VAPAQ9P0L0 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VAPAQ9P0L0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
VAPAQ9P0L0 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
VAPAQ9P0L0 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VAPAQ9P0L0 RPL7P26-201ENST00000333817 754 ntBASIC3.19□□□□□ -1.9
VAPAQ9P0L0 RNU6-600P-201ENST00000362524 99 ntBASIC3.19□□□□□ -1.9
VAPAQ9P0L0 PRRC2CP1-201ENST00000404428 159 ntBASIC3.19□□□□□ -1.9
VAPAQ9P0L0 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.19□□□□□ -1.9
VAPAQ9P0L0 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.19□□□□□ -1.9
VAPAQ9P0L0 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.19□□□□□ -1.9
VAPAQ9P0L0 MTCO1P43-201ENST00000431831 488 ntBASIC3.19□□□□□ -1.9
VAPAQ9P0L0 AC006994.1-201ENST00000438212 839 ntBASIC3.19□□□□□ -1.9
VAPAQ9P0L0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.19□□□□□ -1.9
VAPAQ9P0L0 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.19□□□□□ -1.9
VAPAQ9P0L0 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.19□□□□□ -1.9
VAPAQ9P0L0 AC125238.1-201ENST00000448842 249 ntBASIC3.19□□□□□ -1.9
VAPAQ9P0L0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.19□□□□□ -1.9
VAPAQ9P0L0 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.19□□□□□ -1.9
VAPAQ9P0L0 AC021146.5-201ENST00000503544 545 ntBASIC3.19□□□□□ -1.9
VAPAQ9P0L0 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VAPAQ9P0L0 HMGN1P11-201ENST00000508668 303 ntBASIC3.19□□□□□ -1.9
VAPAQ9P0L0 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.19□□□□□ -1.9
VAPAQ9P0L0 AC104115.2-201ENST00000523026 687 ntBASIC3.19□□□□□ -1.9
VAPAQ9P0L0 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.19□□□□□ -1.9
VAPAQ9P0L0 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.19□□□□□ -1.9
VAPAQ9P0L0 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.19□□□□□ -1.9
VAPAQ9P0L0 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VAPAQ9P0L0 SNORA51-201ENST00000606420 132 ntBASIC3.19□□□□□ -1.9
VAPAQ9P0L0 AL391497.1-201ENST00000608671 547 ntBASIC3.19□□□□□ -1.9
VAPAQ9P0L0 CR589904.2-201ENST00000612533 440 ntBASIC3.19□□□□□ -1.9
VAPAQ9P0L0 AC005156.1-201ENST00000613371 573 ntBASIC3.19□□□□□ -1.9
VAPAQ9P0L0 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.19□□□□□ -1.9
VAPAQ9P0L0 AC073476.4-201ENST00000628409 72 ntBASIC3.19□□□□□ -1.9
VAPAQ9P0L0 MTCO1P24-201ENST00000515438 1558 ntBASIC3.19□□□□□ -1.9
VAPAQ9P0L0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VAPAQ9P0L0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
VAPAQ9P0L0 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
VAPAQ9P0L0 DDX6P1-205ENST00000441966 1436 ntBASIC3.19□□□□□ -1.9
VAPAQ9P0L0 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VAPAQ9P0L0 METTL21EP-201ENST00000298105 713 ntBASIC3.18□□□□□ -1.9
VAPAQ9P0L0 RNA5SP383-201ENST00000362934 120 ntBASIC3.18□□□□□ -1.9
VAPAQ9P0L0 SNORA70.2-201ENST00000364506 135 ntBASIC3.18□□□□□ -1.9
VAPAQ9P0L0 VTA1P1-201ENST00000414044 866 ntBASIC3.18□□□□□ -1.9
VAPAQ9P0L0 RPL7P2-201ENST00000427639 268 ntBASIC3.18□□□□□ -1.9
VAPAQ9P0L0 RPL21P112-201ENST00000434403 463 ntBASIC3.18□□□□□ -1.9
VAPAQ9P0L0 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VAPAQ9P0L0 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.18□□□□□ -1.9
VAPAQ9P0L0 SNORD105B-201ENST00000458770 79 ntBASIC3.18□□□□□ -1.9
VAPAQ9P0L0 AC126121.1-201ENST00000482313 553 ntBASIC3.18□□□□□ -1.9
VAPAQ9P0L0 OR5H3P-201ENST00000502817 919 ntBASIC3.18□□□□□ -1.9
VAPAQ9P0L0 AC112198.1-201ENST00000505369 1220 ntBASIC3.18□□□□□ -1.9
VAPAQ9P0L0 TXNP6-201ENST00000510190 310 ntBASIC3.18□□□□□ -1.9
VAPAQ9P0L0 RNU1-143P-201ENST00000516296 146 ntBASIC3.18□□□□□ -1.9
VAPAQ9P0L0 RN7SKP244-201ENST00000516513 307 ntBASIC3.18□□□□□ -1.9
VAPAQ9P0L0 RNU6-551P-201ENST00000516661 103 ntBASIC3.18□□□□□ -1.9
VAPAQ9P0L0 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.18□□□□□ -1.9
VAPAQ9P0L0 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.18□□□□□ -1.9
VAPAQ9P0L0 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.18□□□□□ -1.9
VAPAQ9P0L0 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.18□□□□□ -1.9
VAPAQ9P0L0 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VAPAQ9P0L0 AC005476.1-201ENST00000554427 397 ntBASIC3.18□□□□□ -1.9
VAPAQ9P0L0 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.18□□□□□ -1.9
VAPAQ9P0L0 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.18□□□□□ -1.9
VAPAQ9P0L0 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.18□□□□□ -1.9
VAPAQ9P0L0 AC067959.1-201ENST00000604334 379 ntBASIC3.18□□□□□ -1.9
VAPAQ9P0L0 AL365400.2-201ENST00000605604 902 ntBASIC3.18□□□□□ -1.9
VAPAQ9P0L0 U1.23-201ENST00000610293 146 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms