Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AL118496.1-201ENST00000440201 1812 ntBASIC3.28□□□□□ -1.88
CISHQ9NSE2 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
CISHQ9NSE2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CISHQ9NSE2 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CISHQ9NSE2 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CISHQ9NSE2 RNU6-167P-201ENST00000384292 106 ntBASIC3.27□□□□□ -1.89
CISHQ9NSE2 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CISHQ9NSE2 KRR1P1-201ENST00000419430 803 ntBASIC3.27□□□□□ -1.89
CISHQ9NSE2 AC006946.1-201ENST00000429106 328 ntBASIC3.27□□□□□ -1.89
CISHQ9NSE2 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.27□□□□□ -1.89
CISHQ9NSE2 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.27□□□□□ -1.89
CISHQ9NSE2 snoU13.22-201ENST00000459428 104 ntBASIC3.27□□□□□ -1.89
CISHQ9NSE2 RN7SL20P-201ENST00000488827 297 ntBASIC3.27□□□□□ -1.89
CISHQ9NSE2 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.27□□□□□ -1.89
CISHQ9NSE2 KCTD9P5-201ENST00000504141 1170 ntBASIC3.27□□□□□ -1.89
CISHQ9NSE2 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CISHQ9NSE2 AC008885.1-201ENST00000514930 301 ntBASIC3.27□□□□□ -1.89
CISHQ9NSE2 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.27□□□□□ -1.89
CISHQ9NSE2 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.27□□□□□ -1.89
CISHQ9NSE2 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.27□□□□□ -1.89
CISHQ9NSE2 BMS1P7-201ENST00000602440 1052 ntBASIC3.27□□□□□ -1.89
CISHQ9NSE2 MIR8057-201ENST00000620957 69 ntBASIC3.27□□□□□ -1.89
CISHQ9NSE2 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CISHQ9NSE2 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.27□□□□□ -1.89
CISHQ9NSE2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CISHQ9NSE2 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.27□□□□□ -1.89
CISHQ9NSE2 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.26□□□□□ -1.89
CISHQ9NSE2 AC073325.2-201ENST00000339545 159 ntBASIC3.26□□□□□ -1.89
CISHQ9NSE2 Y_RNA.62-201ENST00000362840 99 ntBASIC3.26□□□□□ -1.89
CISHQ9NSE2 RNA5SP387-201ENST00000364226 106 ntBASIC3.26□□□□□ -1.89
CISHQ9NSE2 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CISHQ9NSE2 RN7SKP220-201ENST00000410611 288 ntBASIC3.26□□□□□ -1.89
CISHQ9NSE2 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.26□□□□□ -1.89
CISHQ9NSE2 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.26□□□□□ -1.89
CISHQ9NSE2 RPS15AP6-201ENST00000420703 385 ntBASIC3.26□□□□□ -1.89
CISHQ9NSE2 AC009965.2-201ENST00000425328 970 ntBASIC3.26□□□□□ -1.89
CISHQ9NSE2 TXNP1-201ENST00000441872 371 ntBASIC3.26□□□□□ -1.89
CISHQ9NSE2 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.26□□□□□ -1.89
CISHQ9NSE2 HMGN2P7-201ENST00000456186 273 ntBASIC3.26□□□□□ -1.89
CISHQ9NSE2 RPL9P32-201ENST00000464118 620 ntBASIC3.26□□□□□ -1.89
CISHQ9NSE2 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.26□□□□□ -1.89
CISHQ9NSE2 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.26□□□□□ -1.89
CISHQ9NSE2 CAB39P1-201ENST00000502277 460 ntBASIC3.26□□□□□ -1.89
CISHQ9NSE2 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.26□□□□□ -1.89
CISHQ9NSE2 AC114967.1-201ENST00000504890 259 ntBASIC3.26□□□□□ -1.89
CISHQ9NSE2 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CISHQ9NSE2 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CISHQ9NSE2 PTGES3P3-201ENST00000511479 482 ntBASIC3.26□□□□□ -1.89
CISHQ9NSE2 NDUFB4P9-201ENST00000511646 388 ntBASIC3.26□□□□□ -1.89
CISHQ9NSE2 RN7SKP57-201ENST00000517248 293 ntBASIC3.26□□□□□ -1.89
CISHQ9NSE2 AC067852.4-201ENST00000590314 478 ntBASIC3.26□□□□□ -1.89
CISHQ9NSE2 AC125494.3-201ENST00000602759 455 ntBASIC3.26□□□□□ -1.89
CISHQ9NSE2 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.26□□□□□ -1.89
CISHQ9NSE2 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.26□□□□□ -1.89
CISHQ9NSE2 AL162574.2-201ENST00000614618 657 ntBASIC3.26□□□□□ -1.89
CISHQ9NSE2 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.26□□□□□ -1.89
CISHQ9NSE2 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.26□□□□□ -1.89
CISHQ9NSE2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CISHQ9NSE2 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.26□□□□□ -1.89
CISHQ9NSE2 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.26□□□□□ -1.89
CISHQ9NSE2 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CISHQ9NSE2 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CISHQ9NSE2 AL592494.2-201ENST00000425455 1548 ntBASIC3.25□□□□□ -1.89
CISHQ9NSE2 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CISHQ9NSE2 AC066616.2-201ENST00000559334 1481 ntBASIC3.25□□□□□ -1.89
CISHQ9NSE2 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CISHQ9NSE2 MIR22-201ENST00000362190 85 ntBASIC3.25□□□□□ -1.89
CISHQ9NSE2 MIR124-3-201ENST00000384866 87 ntBASIC3.25□□□□□ -1.89
CISHQ9NSE2 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.25□□□□□ -1.89
CISHQ9NSE2 AJ239321.1-201ENST00000424255 564 ntBASIC3.25□□□□□ -1.89
CISHQ9NSE2 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.25□□□□□ -1.89
CISHQ9NSE2 SNORD108-201ENST00000459332 71 ntBASIC3.25□□□□□ -1.89
CISHQ9NSE2 AP001086.1-201ENST00000494882 321 ntBASIC3.25□□□□□ -1.89
CISHQ9NSE2 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.25□□□□□ -1.89
CISHQ9NSE2 TXNP6-201ENST00000510190 310 ntBASIC3.25□□□□□ -1.89
CISHQ9NSE2 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.25□□□□□ -1.89
CISHQ9NSE2 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.25□□□□□ -1.89
CISHQ9NSE2 AC068657.1-201ENST00000520807 306 ntBASIC3.25□□□□□ -1.89
CISHQ9NSE2 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CISHQ9NSE2 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.25□□□□□ -1.89
CISHQ9NSE2 SNORA35B-201ENST00000607417 129 ntBASIC3.25□□□□□ -1.89
CISHQ9NSE2 AL589935.2-201ENST00000616471 1231 ntBASIC3.25□□□□□ -1.89
CISHQ9NSE2 AC019080.5-201ENST00000624891 757 ntBASIC3.25□□□□□ -1.89
CISHQ9NSE2 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CISHQ9NSE2 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CISHQ9NSE2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.25□□□□□ -1.89
CISHQ9NSE2 AL021368.2-201ENST00000606125 5352 ntBASIC3.25□□□□□ -1.89
CISHQ9NSE2 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CISHQ9NSE2 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CISHQ9NSE2 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.24□□□□□ -1.89
CISHQ9NSE2 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CISHQ9NSE2 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.24□□□□□ -1.89
CISHQ9NSE2 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CISHQ9NSE2 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CISHQ9NSE2 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.24□□□□□ -1.89
CISHQ9NSE2 MIR148B-201ENST00000362252 99 ntBASIC3.24□□□□□ -1.89
CISHQ9NSE2 SNORA46-201ENST00000384762 135 ntBASIC3.24□□□□□ -1.89
CISHQ9NSE2 AC245054.2-201ENST00000415639 319 ntBASIC3.24□□□□□ -1.89
CISHQ9NSE2 OR2AS1P-201ENST00000427827 319 ntBASIC3.24□□□□□ -1.89
CISHQ9NSE2 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms