Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.27□□□□□ -1.57
VTA1Q9NP79 AC079140.3-201ENST00000511111 550 ntBASIC5.27□□□□□ -1.57
VTA1Q9NP79 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC5.27□□□□□ -1.57
VTA1Q9NP79 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
VTA1Q9NP79 AGGF1P4-201ENST00000568249 801 ntBASIC5.27□□□□□ -1.57
VTA1Q9NP79 AC007599.1-201ENST00000568688 1174 ntBASIC5.27□□□□□ -1.57
VTA1Q9NP79 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.27□□□□□ -1.57
VTA1Q9NP79 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.27□□□□□ -1.57
VTA1Q9NP79 MIR4512-201ENST00000583257 77 ntBASIC5.27□□□□□ -1.57
VTA1Q9NP79 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.27□□□□□ -1.57
VTA1Q9NP79 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.27□□□□□ -1.57
VTA1Q9NP79 AC020910.2-201ENST00000603635 610 ntBASIC5.27□□□□□ -1.57
VTA1Q9NP79 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.27□□□□□ -1.57
VTA1Q9NP79 AC009509.4-201ENST00000619202 509 ntBASIC5.27□□□□□ -1.57
VTA1Q9NP79 AC083843.3-201ENST00000623679 2186 ntBASIC5.27□□□□□ -1.57
VTA1Q9NP79 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.27□□□□□ -1.57
VTA1Q9NP79 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VTA1Q9NP79 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.27□□□□□ -1.57
VTA1Q9NP79 AL031985.3-201ENST00000565390 2449 ntBASIC5.27□□□□□ -1.57
VTA1Q9NP79 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
VTA1Q9NP79 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.27□□□□□ -1.57
VTA1Q9NP79 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
VTA1Q9NP79 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
VTA1Q9NP79 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VTA1Q9NP79 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 AL122126.1-201ENST00000546905 1318 ntBASIC5.26□□□□□ -1.57
VTA1Q9NP79 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VTA1Q9NP79 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VTA1Q9NP79 AC108467.2-201ENST00000617640 1597 ntBASIC5.26□□□□□ -1.57
VTA1Q9NP79 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 MTND5P29-201ENST00000458676 1807 ntBASIC5.26□□□□□ -1.57
VTA1Q9NP79 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VTA1Q9NP79 SNORA51.6-201ENST00000384151 125 ntBASIC5.26□□□□□ -1.57
VTA1Q9NP79 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VTA1Q9NP79 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 AC004022.2-201ENST00000413824 193 ntBASIC5.26□□□□□ -1.57
VTA1Q9NP79 RPL21P108-201ENST00000413857 481 ntBASIC5.26□□□□□ -1.57
VTA1Q9NP79 AC092647.1-201ENST00000420654 287 ntBASIC5.26□□□□□ -1.57
VTA1Q9NP79 RPS27AP14-201ENST00000422868 454 ntBASIC5.26□□□□□ -1.57
VTA1Q9NP79 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 RPL12P46-201ENST00000436610 195 ntBASIC5.26□□□□□ -1.57
VTA1Q9NP79 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 AP000936.2-201ENST00000447151 681 ntBASIC5.26□□□□□ -1.57
VTA1Q9NP79 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 AC026410.2-201ENST00000460281 156 ntBASIC5.26□□□□□ -1.57
VTA1Q9NP79 AP000942.1-201ENST00000463969 747 ntBASIC5.26□□□□□ -1.57
VTA1Q9NP79 AC011276.1-201ENST00000469688 323 ntBASIC5.26□□□□□ -1.57
VTA1Q9NP79 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 RN7SKP82-201ENST00000516786 223 ntBASIC5.26□□□□□ -1.57
VTA1Q9NP79 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VTA1Q9NP79 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 AC012414.6-201ENST00000568241 401 ntBASIC5.26□□□□□ -1.57
VTA1Q9NP79 MIR4504-201ENST00000577413 92 ntBASIC5.26□□□□□ -1.57
VTA1Q9NP79 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 AC022146.1-201ENST00000595307 847 ntBASIC5.26□□□□□ -1.57
VTA1Q9NP79 AL136363.2-201ENST00000604173 851 ntBASIC5.26□□□□□ -1.57
VTA1Q9NP79 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.26□□□□□ -1.57
VTA1Q9NP79 AC107214.2-201ENST00000608204 634 ntBASIC5.26□□□□□ -1.57
VTA1Q9NP79 AC012409.3-201ENST00000611343 981 ntBASIC5.26□□□□□ -1.57
VTA1Q9NP79 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VTA1Q9NP79 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VTA1Q9NP79 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.26□□□□□ -1.57
VTA1Q9NP79 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
VTA1Q9NP79 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VTA1Q9NP79 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.25□□□□□ -1.57
VTA1Q9NP79 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VTA1Q9NP79 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
VTA1Q9NP79 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.25□□□□□ -1.57
VTA1Q9NP79 RNA5SP509-201ENST00000364577 119 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
VTA1Q9NP79 RNU6-1293P-201ENST00000384077 107 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 AC007066.1-201ENST00000392902 381 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 SDHCP2-201ENST00000398565 501 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 RPS24P12-201ENST00000402084 394 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 SSXP10-201ENST00000402595 565 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 VN1R8P-201ENST00000407739 893 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.25□□□□□ -1.57
VTA1Q9NP79 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.25□□□□□ -1.57
VTA1Q9NP79 UBTFL3-201ENST00000418934 1024 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 RPL21P32-201ENST00000419877 477 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.25□□□□□ -1.57
VTA1Q9NP79 RPL36P19-201ENST00000430744 301 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms