Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AL672296.1-201ENST00000427780 2158 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 HSPE1P26-201ENST00000405341 275 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 RNU6-628P-201ENST00000410675 107 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 VTA1P1-201ENST00000414044 866 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AL445183.3-201ENST00000414168 502 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 RPL32P35-201ENST00000415214 394 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 TRGV6-201ENST00000417928 299 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 PNRC2P1-201ENST00000423940 420 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AL591419.1-201ENST00000427423 339 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AC005189.1-201ENST00000431286 310 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 ELOCP11-201ENST00000436690 332 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 RPS27P5-201ENST00000444247 244 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 ELOCP16-201ENST00000444494 332 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 TPMTP4-201ENST00000450749 678 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 HMGB3P30-201ENST00000457863 606 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AC104687.1-201ENST00000485829 412 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AC078817.1-201ENST00000492623 435 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 SETP14-201ENST00000497538 873 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 OR5H3P-201ENST00000502817 919 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 RNA5SP217-201ENST00000515959 91 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 OR7E13P-201ENST00000526052 910 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AP000619.3-201ENST00000535634 1127 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AC023161.2-201ENST00000551218 780 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 POLR2KP1-201ENST00000553226 168 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 PARP1P2-201ENST00000556806 195 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AC055876.1-202ENST00000567053 138 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AC136624.4-201ENST00000573044 370 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AC053481.4-201ENST00000583164 216 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AC092474.3-201ENST00000603022 568 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AC006077.1-201ENST00000604746 343 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AP001033.2-201ENST00000609701 1003 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AC005344.1-201ENST00000613391 459 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AC123768.4-201ENST00000616244 701 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 MIR6875-201ENST00000617506 72 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AL354798.1-201ENST00000622505 329 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AP000553.6-201ENST00000641242 118 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 DCAF13P1-201ENST00000495256 1330 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 AC025125.1-201ENST00000624743 1922 ntBASIC3.13□□□□□ -1.91
HMG20AQ9NP66 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.13□□□□□ -1.91
HMG20AQ9NP66 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HMG20AQ9NP66 AP004289.2-201ENST00000444413 1457 ntBASIC3.12□□□□□ -1.91
HMG20AQ9NP66 RNU6-543P-201ENST00000362576 108 ntBASIC3.12□□□□□ -1.91
HMG20AQ9NP66 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.12□□□□□ -1.91
HMG20AQ9NP66 MIR30B-201ENST00000384850 88 ntBASIC3.12□□□□□ -1.91
HMG20AQ9NP66 MIR591-201ENST00000385290 95 ntBASIC3.12□□□□□ -1.91
HMG20AQ9NP66 SOD2P1-201ENST00000396543 562 ntBASIC3.12□□□□□ -1.91
HMG20AQ9NP66 PTGES3P2-201ENST00000407942 482 ntBASIC3.12□□□□□ -1.91
HMG20AQ9NP66 RNU4-27P-201ENST00000410889 139 ntBASIC3.12□□□□□ -1.91
HMG20AQ9NP66 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.12□□□□□ -1.91
HMG20AQ9NP66 TATDN1P1-201ENST00000414123 891 ntBASIC3.12□□□□□ -1.91
HMG20AQ9NP66 VN1R42P-201ENST00000424651 344 ntBASIC3.12□□□□□ -1.91
HMG20AQ9NP66 TRIAP1P1-201ENST00000427062 225 ntBASIC3.12□□□□□ -1.91
HMG20AQ9NP66 AC093151.1-201ENST00000427711 313 ntBASIC3.12□□□□□ -1.91
HMG20AQ9NP66 OR2AS1P-201ENST00000427827 319 ntBASIC3.12□□□□□ -1.91
HMG20AQ9NP66 RPL17P35-201ENST00000432217 549 ntBASIC3.12□□□□□ -1.91
HMG20AQ9NP66 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.12□□□□□ -1.91
HMG20AQ9NP66 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.12□□□□□ -1.91
HMG20AQ9NP66 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.12□□□□□ -1.91
HMG20AQ9NP66 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.12□□□□□ -1.91
HMG20AQ9NP66 UBDP1-202ENST00000457888 382 ntBASIC3.12□□□□□ -1.91
HMG20AQ9NP66 AL161747.1-201ENST00000480068 358 ntBASIC3.12□□□□□ -1.91
HMG20AQ9NP66 AL139099.1-201ENST00000497398 403 ntBASIC3.12□□□□□ -1.91
HMG20AQ9NP66 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.12□□□□□ -1.91
HMG20AQ9NP66 RN7SKP21-201ENST00000516503 220 ntBASIC3.12□□□□□ -1.91
HMG20AQ9NP66 MED28P5-201ENST00000528254 438 ntBASIC3.12□□□□□ -1.91
HMG20AQ9NP66 OR8R1P-201ENST00000543943 764 ntBASIC3.12□□□□□ -1.91
HMG20AQ9NP66 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.12□□□□□ -1.91
HMG20AQ9NP66 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HMG20AQ9NP66 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.12□□□□□ -1.91
HMG20AQ9NP66 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.12□□□□□ -1.91
HMG20AQ9NP66 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.12□□□□□ -1.91
HMG20AQ9NP66 MIR4286-201ENST00000580651 93 ntBASIC3.12□□□□□ -1.91
HMG20AQ9NP66 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.12□□□□□ -1.91
HMG20AQ9NP66 AC005776.1-201ENST00000603164 290 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms