Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 RPS24P8-201ENST00000431490 402 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 AC010881.1-201ENST00000433830 235 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 MRPL50P4-201ENST00000446432 475 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 RPL23AP15-201ENST00000450202 459 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 AL672138.1-201ENST00000450604 1015 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 AL121877.1-201ENST00000453704 622 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 RN7SL51P-201ENST00000468230 285 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 AC100832.1-201ENST00000471945 383 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 AC092754.1-201ENST00000472975 479 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 AC093278.1-201ENST00000494700 600 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 TMEM251P1-201ENST00000503717 318 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 HMGN1P9-201ENST00000515212 298 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 AC125612.1-201ENST00000547580 377 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 MIR5186-201ENST00000577504 120 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 SNORD39.3-201ENST00000584451 71 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 AP000769.2-201ENST00000602344 396 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 AC010632.3-201ENST00000611377 369 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 AC022467.1-201ENST00000614738 749 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 RMST_7.1-201ENST00000621935 268 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 AC024940.5-201ENST00000622889 474 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 MIR1302-1-201ENST00000637932 143 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 CASC19-284ENST00000642142 1868 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 CKAP2P1-201ENST00000555477 2049 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 Y_RNA.46-201ENST00000362695 102 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 RNA5SP319-201ENST00000362768 119 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 DHFRP6-201ENST00000401776 268 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 MRPL42P2-201ENST00000403169 426 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AL391361.1-201ENST00000405580 489 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 RNA5SP118-201ENST00000410385 109 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 RNU6-1068P-201ENST00000410958 103 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AC211486.3-201ENST00000412694 621 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 RPL12P9-201ENST00000412942 488 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 MRPL50P2-201ENST00000416821 482 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AC234782.4-201ENST00000417646 1048 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 MTATP6P18-201ENST00000417994 673 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AL353729.1-201ENST00000425044 720 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AL606489.2-201ENST00000433886 234 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 RPS15AP17-201ENST00000470598 390 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 IGBP1P4-201ENST00000503202 879 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 ATP5LP3-201ENST00000514223 304 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 RNA5SP401-201ENST00000515920 127 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 Vault.3-201ENST00000516676 95 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 PHBP17-201ENST00000528576 541 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AC008127.2-201ENST00000549925 1075 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AC011611.1-201ENST00000552179 197 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms