Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AL359385.1-201ENST00000456509 365 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AC022215.1-201ENST00000481770 362 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AC114967.1-201ENST00000504890 259 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AL671862.1-201ENST00000515851 349 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 RNU6-615P-201ENST00000516065 106 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AC105233.3-201ENST00000531125 744 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AC092325.1-201ENST00000566449 554 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 MIR3936-201ENST00000584304 110 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AC055876.5-201ENST00000605667 259 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AL008729.2-201ENST00000606393 473 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AC011816.2-201ENST00000607089 556 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AC016769.4-201ENST00000616893 535 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AC009268.2-201ENST00000621925 457 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AL592437.2-201ENST00000421655 2434 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 THAP12P5-201ENST00000405864 2275 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 AL022322.2-201ENST00000624072 20397 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 AL139811.1-201ENST00000424779 2299 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 RNU6-989P-201ENST00000362756 107 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 MTCO3P40-201ENST00000392516 676 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 RPL23AP32-201ENST00000395315 459 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 MIR1250-201ENST00000408098 113 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 RPL12P9-201ENST00000412942 488 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 RPSAP35-201ENST00000413753 818 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 MTND3P17-201ENST00000416968 344 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 AC005517.2-201ENST00000424673 553 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 MTND4LP10-201ENST00000435146 291 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 AC104850.1-201ENST00000435940 476 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 AC114495.1-201ENST00000441274 436 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 AC112653.1-201ENST00000443851 386 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 Z99127.3-201ENST00000448158 395 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 TPT1P13-201ENST00000449760 499 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 AL035090.1-201ENST00000454835 332 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 C1DP4-201ENST00000455429 424 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 AC146507.1-201ENST00000468335 354 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 MTCO3P38-201ENST00000468910 766 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 RPL32P9-201ENST00000487963 407 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 MTAPP1-201ENST00000489154 819 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 RPS4XP18-201ENST00000495480 763 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 AP000907.2-201ENST00000530827 353 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 OR8L1P-201ENST00000534005 955 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 SETP2-201ENST00000553886 926 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 AC006349.1-201ENST00000555526 235 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 AL049872.1-201ENST00000556323 322 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 AC107954.1-201ENST00000565906 727 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 MIR3118-1-201ENST00000581787 76 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 AC060771.1-201ENST00000582031 164 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 AL355812.1-201ENST00000603215 216 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 MLECP1-201ENST00000615893 709 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 AC091953.2-201ENST00000623979 160 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 AC109780.1-201ENST00000451768 1344 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 C4BPAP1-201ENST00000415474 1893 ntBASIC5.43□□□□□ -1.54
TRIM55Q9BYV6 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms