Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 AC078899.5-201ENST00000612475 178 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 MIR6875-201ENST00000617506 72 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 MIR6075-201ENST00000620782 95 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 AL672167.1-205ENST00000641112 3080 ntBASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTFDC1Q9BY42 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 AL139811.1-201ENST00000424779 2299 ntBASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 ZNF33CP-201ENST00000432492 2030 ntBASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 AL391994.1-201ENST00000254724 282 ntBASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 Y_RNA.18-201ENST00000362461 102 ntBASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 MIR670-201ENST00000390142 98 ntBASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 BTBD10P2-201ENST00000404779 676 ntBASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 OR2AH1P-201ENST00000425717 928 ntBASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 RPL21P91-201ENST00000429231 479 ntBASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 KATNBL1P3-201ENST00000443475 909 ntBASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 AL358232.1-201ENST00000448030 501 ntBASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 AC092757.1-201ENST00000467293 467 ntBASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 BZW1P2-201ENST00000473537 826 ntBASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 MTND4LP31-201ENST00000514859 294 ntBASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 MIR5186-201ENST00000577504 120 ntBASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 AC013444.2-201ENST00000603317 787 ntBASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 AC007566.2-201ENST00000603642 413 ntBASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 AL451086.1-201ENST00000605596 223 ntBASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 AL008729.2-201ENST00000606393 473 ntBASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 RNU4-89P-201ENST00000607443 133 ntBASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 AC243773.3-201ENST00000613270 256 ntBASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 AL021997.2-201ENST00000615674 271 ntBASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 AC010608.2-201ENST00000624830 470 ntBASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 AC007671.2-201ENST00000637344 619 ntBASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RTFDC1Q9BY42 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 RLIMP1-201ENST00000339626 1680 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 SNRPEP3-201ENST00000338402 276 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 RNU6-1200P-201ENST00000384162 107 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 ENSAP1-201ENST00000392855 326 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 AC097374.1-203ENST00000400783 485 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 AC073136.2-201ENST00000417282 849 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 AL593851.1-201ENST00000426171 157 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 AC073335.1-201ENST00000427776 363 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 TXNL1P1-201ENST00000429528 554 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 TMX2P1-201ENST00000436507 708 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 MTND6P18-201ENST00000439477 513 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 VN1R10P-201ENST00000447106 875 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 VN1R34P-201ENST00000447387 883 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 VN1R105P-201ENST00000486595 910 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 OR4G11P-201ENST00000492842 939 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms