Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 UBE2V1P1-201ENST00000430836 445 ntBASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 CENPBD1P1-201ENST00000464061 469 ntBASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 AC020893.1-201ENST00000502452 580 ntBASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 AC108157.1-201ENST00000510511 539 ntBASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 AC090136.1-201ENST00000520009 240 ntBASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 AC027807.1-201ENST00000559921 996 ntBASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 MIR5047-201ENST00000579212 100 ntBASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 MIR4276-201ENST00000584832 70 ntBASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 CKS1BP3-201ENST00000600888 237 ntBASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 MTCO3P22-201ENST00000603219 784 ntBASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 AC110801.1-201ENST00000623590 212 ntBASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RPAP1Q9BWH6 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 AL645937.1-201ENST00000641739 1652 ntBASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 AC114546.3-201ENST00000623582 1734 ntBASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 RNU6-328P-201ENST00000390887 106 ntBASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 NPM1P24-201ENST00000428039 894 ntBASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 AC236972.1-201ENST00000433225 199 ntBASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 AC006994.1-201ENST00000438212 839 ntBASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 Z75741.1-201ENST00000446793 314 ntBASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 TRBV8-2-201ENST00000475637 270 ntBASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 SNORA70.19-201ENST00000516717 90 ntBASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 RN7SKP289-201ENST00000517244 295 ntBASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 PDCL2P2-201ENST00000533651 189 ntBASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 MIR5680-201ENST00000577577 84 ntBASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 AL606834.2-201ENST00000602954 668 ntBASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 AC055764.2-201ENST00000610089 670 ntBASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 AC139769.3-201ENST00000618383 175 ntBASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.1□□□□□ -1.75
RPAP1Q9BWH6 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 RNA5SP197-201ENST00000363357 119 ntBASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 AC013404.1-201ENST00000413068 249 ntBASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 LIPT1P1-201ENST00000415870 1186 ntBASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 AC073464.3-201ENST00000422564 712 ntBASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 RPL31P12-201ENST00000422587 358 ntBASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 AL590623.1-201ENST00000427864 105 ntBASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 AL160175.1-201ENST00000428124 247 ntBASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 AC091862.1-201ENST00000438016 1100 ntBASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 MTND3P4-201ENST00000453537 303 ntBASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 AP001486.1-201ENST00000463339 476 ntBASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 NDUFB4P9-201ENST00000511646 388 ntBASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 UBE2NP1-201ENST00000545592 458 ntBASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 AL049870.4-201ENST00000555741 486 ntBASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 AL137843.1-201ENST00000605078 385 ntBASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 AC090525.3-201ENST00000605601 189 ntBASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 Z83843.1-201ENST00000604070 3685 ntBASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
RPAP1Q9BWH6 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.09□□□□□ -1.76
RPAP1Q9BWH6 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RPAP1Q9BWH6 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RPAP1Q9BWH6 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.08□□□□□ -1.76
RPAP1Q9BWH6 DDX6P1-205ENST00000441966 1436 ntBASIC4.08□□□□□ -1.76
RPAP1Q9BWH6 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms