Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RNU6-723P-201ENST00000383973 107 ntBASIC5.04□□□□□ -1.6
HPS3Q969F9 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HPS3Q969F9 TPMTP3-201ENST00000411928 735 ntBASIC5.04□□□□□ -1.6
HPS3Q969F9 BTF3L4P1-201ENST00000413813 468 ntBASIC5.04□□□□□ -1.6
HPS3Q969F9 HSFY4P-201ENST00000415994 1181 ntBASIC5.04□□□□□ -1.6
HPS3Q969F9 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HPS3Q969F9 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.04□□□□□ -1.6
HPS3Q969F9 MTCO2P16-201ENST00000436962 677 ntBASIC5.04□□□□□ -1.6
HPS3Q969F9 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HPS3Q969F9 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.04□□□□□ -1.6
HPS3Q969F9 HMGB3P21-201ENST00000452483 547 ntBASIC5.04□□□□□ -1.6
HPS3Q969F9 AC010326.1-201ENST00000462726 602 ntBASIC5.04□□□□□ -1.6
HPS3Q969F9 RAP1BP2-201ENST00000478270 544 ntBASIC5.04□□□□□ -1.6
HPS3Q969F9 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HPS3Q969F9 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.04□□□□□ -1.6
HPS3Q969F9 AC091435.1-201ENST00000505442 584 ntBASIC5.04□□□□□ -1.6
HPS3Q969F9 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.04□□□□□ -1.6
HPS3Q969F9 RNU6-150P-201ENST00000516237 95 ntBASIC5.04□□□□□ -1.6
HPS3Q969F9 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.04□□□□□ -1.6
HPS3Q969F9 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.04□□□□□ -1.6
HPS3Q969F9 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.04□□□□□ -1.6
HPS3Q969F9 AP001781.1-201ENST00000530977 207 ntBASIC5.04□□□□□ -1.6
HPS3Q969F9 AC024909.2-201ENST00000553035 286 ntBASIC5.04□□□□□ -1.6
HPS3Q969F9 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.04□□□□□ -1.6
HPS3Q969F9 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.04□□□□□ -1.6
HPS3Q969F9 ROCK1P1-201ENST00000573767 549 ntBASIC5.04□□□□□ -1.6
HPS3Q969F9 MIR4270-201ENST00000581799 70 ntBASIC5.04□□□□□ -1.6
HPS3Q969F9 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.04□□□□□ -1.6
HPS3Q969F9 AC103792.1-201ENST00000603591 919 ntBASIC5.04□□□□□ -1.6
HPS3Q969F9 AC092354.1-201ENST00000606057 376 ntBASIC5.04□□□□□ -1.6
HPS3Q969F9 AL731566.2-201ENST00000618971 317 ntBASIC5.04□□□□□ -1.6
HPS3Q969F9 AL356596.1-201ENST00000624230 379 ntBASIC5.04□□□□□ -1.6
HPS3Q969F9 U6.101-201ENST00000637707 76 ntBASIC5.04□□□□□ -1.6
HPS3Q969F9 A2MP1-204ENST00000566278 4130 ntBASIC5.04□□□□□ -1.6
HPS3Q969F9 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HPS3Q969F9 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HPS3Q969F9 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
HPS3Q969F9 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HPS3Q969F9 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HPS3Q969F9 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HPS3Q969F9 SCN1A-220ENST00000641603 12506 ntBASIC5.03□□□□□ -1.6
HPS3Q969F9 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HPS3Q969F9 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.03□□□□□ -1.6
HPS3Q969F9 Y_RNA.51-201ENST00000362725 102 ntBASIC5.03□□□□□ -1.6
HPS3Q969F9 RNVU1-6-201ENST00000364688 164 ntBASIC5.03□□□□□ -1.6
HPS3Q969F9 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HPS3Q969F9 Y_RNA.436-201ENST00000384097 102 ntBASIC5.03□□□□□ -1.6
HPS3Q969F9 EIF5P1-201ENST00000400019 1231 ntBASIC5.03□□□□□ -1.6
HPS3Q969F9 BTBD10P2-201ENST00000404779 676 ntBASIC5.03□□□□□ -1.6
HPS3Q969F9 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HPS3Q969F9 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HPS3Q969F9 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HPS3Q969F9 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.03□□□□□ -1.6
HPS3Q969F9 AL049610.1-201ENST00000423374 372 ntBASIC5.03□□□□□ -1.6
HPS3Q969F9 MTCO3P5-201ENST00000433620 714 ntBASIC5.03□□□□□ -1.6
HPS3Q969F9 RPL23AP74-201ENST00000437246 471 ntBASIC5.03□□□□□ -1.6
HPS3Q969F9 SNRPEP7-201ENST00000438350 220 ntBASIC5.03□□□□□ -1.6
HPS3Q969F9 THAP5P1-201ENST00000439089 262 ntBASIC5.03□□□□□ -1.6
HPS3Q969F9 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.03□□□□□ -1.6
HPS3Q969F9 AL138878.2-201ENST00000440581 1241 ntBASIC5.03□□□□□ -1.6
HPS3Q969F9 ZNF114P1-201ENST00000453500 292 ntBASIC5.03□□□□□ -1.6
HPS3Q969F9 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.03□□□□□ -1.6
HPS3Q969F9 AC026410.2-201ENST00000460281 156 ntBASIC5.03□□□□□ -1.6
HPS3Q969F9 RPL7P22-201ENST00000466005 733 ntBASIC5.03□□□□□ -1.6
HPS3Q969F9 AC006967.1-201ENST00000467608 589 ntBASIC5.03□□□□□ -1.6
HPS3Q969F9 AC093267.1-201ENST00000489176 961 ntBASIC5.03□□□□□ -1.6
HPS3Q969F9 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.03□□□□□ -1.6
HPS3Q969F9 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.03□□□□□ -1.6
HPS3Q969F9 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.03□□□□□ -1.6
HPS3Q969F9 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.03□□□□□ -1.6
HPS3Q969F9 OR4A45P-201ENST00000529954 901 ntBASIC5.03□□□□□ -1.6
HPS3Q969F9 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.03□□□□□ -1.6
HPS3Q969F9 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.03□□□□□ -1.6
HPS3Q969F9 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.03□□□□□ -1.6
HPS3Q969F9 AL133338.2-201ENST00000604292 736 ntBASIC5.03□□□□□ -1.6
HPS3Q969F9 AC010857.1-201ENST00000606398 594 ntBASIC5.03□□□□□ -1.6
HPS3Q969F9 AL353600.1-201ENST00000608148 251 ntBASIC5.03□□□□□ -1.6
HPS3Q969F9 AC020634.1-201ENST00000608701 549 ntBASIC5.03□□□□□ -1.6
HPS3Q969F9 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HPS3Q969F9 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.03□□□□□ -1.6
HPS3Q969F9 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.03□□□□□ -1.6
HPS3Q969F9 MIR6810-201ENST00000622701 70 ntBASIC5.03□□□□□ -1.6
HPS3Q969F9 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HPS3Q969F9 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.03□□□□□ -1.6
HPS3Q969F9 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HPS3Q969F9 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HPS3Q969F9 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HPS3Q969F9 AC022893.2-201ENST00000564832 3296 ntBASIC5.03□□□□□ -1.6
HPS3Q969F9 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.03□□□□□ -1.6
HPS3Q969F9 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
HPS3Q969F9 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
HPS3Q969F9 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HPS3Q969F9 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.02□□□□□ -1.61
HPS3Q969F9 AL592148.3-201ENST00000608771 2646 ntBASIC5.02□□□□□ -1.61
HPS3Q969F9 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
HPS3Q969F9 RNU6-660P-201ENST00000364566 109 ntBASIC5.02□□□□□ -1.61
HPS3Q969F9 MIR195-201ENST00000385194 87 ntBASIC5.02□□□□□ -1.61
HPS3Q969F9 MIR921-201ENST00000401133 56 ntBASIC5.02□□□□□ -1.61
HPS3Q969F9 HMGB1P17-201ENST00000403495 628 ntBASIC5.02□□□□□ -1.61
HPS3Q969F9 AL024474.1-201ENST00000404655 591 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms