Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AL161423.1-201ENST00000613700 262 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.63□□□□□ -1.35
HLA-CQ95604 AL691477.1-201ENST00000624398 162 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 AL136313.1-201ENST00000624804 202 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.63□□□□□ -1.35
HLA-CQ95604 AC116667.2-201ENST00000641075 823 ntBASIC6.63□□□□□ -1.35
HLA-CQ95604 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-CQ95604 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-CQ95604 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-CQ95604 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HLA-CQ95604 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
HLA-CQ95604 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HLA-CQ95604 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.62□□□□□ -1.35
HLA-CQ95604 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HLA-CQ95604 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
HLA-CQ95604 AP002370.1-201ENST00000528055 1602 ntBASIC6.62□□□□□ -1.35
HLA-CQ95604 SAGE3P-201ENST00000619800 1635 ntBASIC6.62□□□□□ -1.35
HLA-CQ95604 AC104837.1-201ENST00000444644 1587 ntBASIC6.62□□□□□ -1.35
HLA-CQ95604 RBPJP2-201ENST00000618187 1444 ntBASIC6.62□□□□□ -1.35
HLA-CQ95604 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.62□□□□□ -1.35
HLA-CQ95604 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HLA-CQ95604 Y_RNA.2-201ENST00000362330 96 ntBASIC6.62□□□□□ -1.35
HLA-CQ95604 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
HLA-CQ95604 SNORA19-201ENST00000384737 128 ntBASIC6.62□□□□□ -1.35
HLA-CQ95604 SNORD70.1-201ENST00000391007 85 ntBASIC6.62□□□□□ -1.35
HLA-CQ95604 RNA5SP107-201ENST00000411358 122 ntBASIC6.62□□□□□ -1.35
HLA-CQ95604 DPPA2P3-201ENST00000411853 655 ntBASIC6.62□□□□□ -1.35
HLA-CQ95604 AC245096.1-201ENST00000413104 546 ntBASIC6.62□□□□□ -1.35
HLA-CQ95604 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC6.62□□□□□ -1.35
HLA-CQ95604 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC6.62□□□□□ -1.35
HLA-CQ95604 AL590632.1-201ENST00000424289 371 ntBASIC6.62□□□□□ -1.35
HLA-CQ95604 RPL23AP50-201ENST00000434149 455 ntBASIC6.62□□□□□ -1.35
HLA-CQ95604 RPS17P8-201ENST00000434525 335 ntBASIC6.62□□□□□ -1.35
HLA-CQ95604 AL353597.2-202ENST00000434901 373 ntBASIC6.62□□□□□ -1.35
HLA-CQ95604 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.62□□□□□ -1.35
HLA-CQ95604 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC6.62□□□□□ -1.35
HLA-CQ95604 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC6.62□□□□□ -1.35
HLA-CQ95604 RN7SL432P-201ENST00000484057 298 ntBASIC6.62□□□□□ -1.35
HLA-CQ95604 COX7A2P2-201ENST00000505291 250 ntBASIC6.62□□□□□ -1.35
HLA-CQ95604 AC090958.1-201ENST00000511122 351 ntBASIC6.62□□□□□ -1.35
HLA-CQ95604 RNA5SP384-201ENST00000516615 116 ntBASIC6.62□□□□□ -1.35
HLA-CQ95604 RNU6-1332P-201ENST00000516666 104 ntBASIC6.62□□□□□ -1.35
HLA-CQ95604 RNU4ATAC10P-201ENST00000516967 122 ntBASIC6.62□□□□□ -1.35
HLA-CQ95604 IL7-206ENST00000520269 456 ntTSL 3 BASIC6.62□□□□□ -1.35
HLA-CQ95604 WBP1LP3-201ENST00000523033 208 ntBASIC6.62□□□□□ -1.35
HLA-CQ95604 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.62□□□□□ -1.35
HLA-CQ95604 AC026371.1-201ENST00000551867 419 ntBASIC6.62□□□□□ -1.35
HLA-CQ95604 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC6.62□□□□□ -1.35
HLA-CQ95604 IGHV3-29-201ENST00000604817 344 ntBASIC6.62□□□□□ -1.35
HLA-CQ95604 AC241377.1-201ENST00000619797 406 ntBASIC6.62□□□□□ -1.35
HLA-CQ95604 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.62□□□□□ -1.35
HLA-CQ95604 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
HLA-CQ95604 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HLA-CQ95604 AC022034.1-201ENST00000512867 2156 ntBASIC6.62□□□□□ -1.35
HLA-CQ95604 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
HLA-CQ95604 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HLA-CQ95604 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.62□□□□□ -1.35
HLA-CQ95604 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HLA-CQ95604 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HLA-CQ95604 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HLA-CQ95604 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
HLA-CQ95604 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
HLA-CQ95604 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HLA-CQ95604 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.61□□□□□ -1.35
HLA-CQ95604 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.61□□□□□ -1.35
HLA-CQ95604 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
HLA-CQ95604 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HLA-CQ95604 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC6.61□□□□□ -1.35
HLA-CQ95604 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
HLA-CQ95604 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HLA-CQ95604 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HLA-CQ95604 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.61□□□□□ -1.35
HLA-CQ95604 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
HLA-CQ95604 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
HLA-CQ95604 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.61□□□□□ -1.35
HLA-CQ95604 XIAPP3-201ENST00000312918 795 ntBASIC6.61□□□□□ -1.35
HLA-CQ95604 Y_RNA.180-201ENST00000363867 113 ntBASIC6.61□□□□□ -1.35
HLA-CQ95604 RNU6-1078P-201ENST00000364522 103 ntBASIC6.61□□□□□ -1.35
HLA-CQ95604 SNORD82-201ENST00000365530 70 ntBASIC6.61□□□□□ -1.35
HLA-CQ95604 RNU6-393P-201ENST00000384475 107 ntBASIC6.61□□□□□ -1.35
HLA-CQ95604 Y_RNA.526-201ENST00000384572 110 ntBASIC6.61□□□□□ -1.35
HLA-CQ95604 MIR585-201ENST00000384887 94 ntBASIC6.61□□□□□ -1.35
HLA-CQ95604 SNORA16.2-201ENST00000390991 127 ntBASIC6.61□□□□□ -1.35
HLA-CQ95604 AC008171.1-201ENST00000395058 200 ntBASIC6.61□□□□□ -1.35
HLA-CQ95604 RPL7P2-201ENST00000427639 268 ntBASIC6.61□□□□□ -1.35
HLA-CQ95604 RPL21P91-201ENST00000429231 479 ntBASIC6.61□□□□□ -1.35
HLA-CQ95604 AL645568.3-201ENST00000433683 316 ntBASIC6.61□□□□□ -1.35
HLA-CQ95604 MRPS18BP2-201ENST00000434310 759 ntBASIC6.61□□□□□ -1.35
HLA-CQ95604 OR3D1P-201ENST00000438288 955 ntBASIC6.61□□□□□ -1.35
HLA-CQ95604 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.61□□□□□ -1.35
HLA-CQ95604 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.61□□□□□ -1.35
HLA-CQ95604 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.61□□□□□ -1.35
HLA-CQ95604 AC104472.2-201ENST00000469035 601 ntBASIC6.61□□□□□ -1.35
HLA-CQ95604 AC093270.2-201ENST00000486157 792 ntBASIC6.61□□□□□ -1.35
HLA-CQ95604 AC022447.4-201ENST00000504053 364 ntBASIC6.61□□□□□ -1.35
HLA-CQ95604 AC055733.3-201ENST00000505214 523 ntBASIC6.61□□□□□ -1.35
HLA-CQ95604 AC025465.3-201ENST00000510570 311 ntBASIC6.61□□□□□ -1.35
HLA-CQ95604 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC6.61□□□□□ -1.35
HLA-CQ95604 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
HLA-CQ95604 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms