Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.21□□□□□ -1.9
SHROOM3Q8TF72 EIF1AXP2-201ENST00000555940 413 ntBASIC3.21□□□□□ -1.9
SHROOM3Q8TF72 GTF3AP2-201ENST00000557014 266 ntBASIC3.21□□□□□ -1.9
SHROOM3Q8TF72 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.21□□□□□ -1.9
SHROOM3Q8TF72 AC087468.1-201ENST00000604365 630 ntBASIC3.21□□□□□ -1.9
SHROOM3Q8TF72 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC3.21□□□□□ -1.9
SHROOM3Q8TF72 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.21□□□□□ -1.9
SHROOM3Q8TF72 AC006840.1-201ENST00000623069 542 ntBASIC3.21□□□□□ -1.9
SHROOM3Q8TF72 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SHROOM3Q8TF72 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
SHROOM3Q8TF72 OR5AQ1P-203ENST00000641818 1529 ntBASIC3.21□□□□□ -1.9
SHROOM3Q8TF72 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SHROOM3Q8TF72 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 RNU1-87P-201ENST00000363727 170 ntBASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 U3.42-201ENST00000408746 214 ntBASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 AL139413.1-201ENST00000421309 217 ntBASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 GTF2IP23-201ENST00000423746 351 ntBASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 TOMM20P4-201ENST00000427861 435 ntBASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 RNU6-751P-201ENST00000516382 101 ntBASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 IGKV2D-23-201ENST00000518179 286 ntBASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 SNORA35B-201ENST00000607417 129 ntBASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 RIOK3P1-201ENST00000418778 1528 ntBASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 RPL21P3-201ENST00000395517 478 ntBASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 OR7L1P-201ENST00000456181 380 ntBASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 AC146507.2-201ENST00000460608 476 ntBASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 RPS4XP13-201ENST00000483219 789 ntBASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 AC114967.1-201ENST00000504890 259 ntBASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 RN7SKP132-201ENST00000516001 208 ntBASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 RNU1-41P-201ENST00000516161 162 ntBASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 RNU1-48P-201ENST00000516400 162 ntBASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 AC006539.2-201ENST00000601729 572 ntBASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 AC107905.1-201ENST00000616204 426 ntBASIC3.2□□□□□ -1.9
SHROOM3Q8TF72 DDX18P3-201ENST00000404856 2007 ntBASIC3.19□□□□□ -1.9
SHROOM3Q8TF72 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.19□□□□□ -1.9
SHROOM3Q8TF72 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHROOM3Q8TF72 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHROOM3Q8TF72 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHROOM3Q8TF72 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SHROOM3Q8TF72 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SHROOM3Q8TF72 GSTA8P-201ENST00000404253 637 ntBASIC3.19□□□□□ -1.9
SHROOM3Q8TF72 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SHROOM3Q8TF72 HMGB3P8-201ENST00000449709 577 ntBASIC3.19□□□□□ -1.9
SHROOM3Q8TF72 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.19□□□□□ -1.9
SHROOM3Q8TF72 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.19□□□□□ -1.9
SHROOM3Q8TF72 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.19□□□□□ -1.9
SHROOM3Q8TF72 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SHROOM3Q8TF72 Y_RNA.673-201ENST00000516306 88 ntBASIC3.19□□□□□ -1.9
SHROOM3Q8TF72 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.19□□□□□ -1.9
SHROOM3Q8TF72 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.19□□□□□ -1.9
SHROOM3Q8TF72 AC025423.2-201ENST00000537570 439 ntBASIC3.19□□□□□ -1.9
SHROOM3Q8TF72 MIR3162-201ENST00000581818 82 ntBASIC3.19□□□□□ -1.9
SHROOM3Q8TF72 AC015849.2-201ENST00000605738 409 ntBASIC3.19□□□□□ -1.9
SHROOM3Q8TF72 AL162574.2-201ENST00000614618 657 ntBASIC3.19□□□□□ -1.9
SHROOM3Q8TF72 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SHROOM3Q8TF72 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHROOM3Q8TF72 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHROOM3Q8TF72 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SHROOM3Q8TF72 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 TRBV12-1-201ENST00000479785 344 ntBASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 RN7SKP43-201ENST00000516173 320 ntBASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 AL121603.1-201ENST00000553815 142 ntBASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 AL592494.2-201ENST00000425455 1548 ntBASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 AC245291.1-201ENST00000419501 328 ntBASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 AC006028.1-201ENST00000438379 402 ntBASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 AC105272.1-201ENST00000438604 198 ntBASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 AC107015.1-201ENST00000466902 747 ntBASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 AC073522.1-201ENST00000483312 377 ntBASIC3.18□□□□□ -1.9
SHROOM3Q8TF72 NIPA2P2-201ENST00000496376 1083 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms