Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NEDD1Q8NHV4 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NEDD1Q8NHV4 AC232271.1-201ENST00000602455 2715 ntBASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 RNU6-1120P-201ENST00000362988 108 ntBASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 Y_RNA.117-201ENST00000363294 101 ntBASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 RNU6-456P-201ENST00000384493 107 ntBASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 AL133388.1-201ENST00000404509 287 ntBASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 AL359634.1-202ENST00000404721 284 ntBASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 AC234782.4-201ENST00000417646 1048 ntBASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 SLC35E1P1-201ENST00000419313 864 ntBASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 RPL31P12-201ENST00000422587 358 ntBASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 RAC1P6-201ENST00000423911 575 ntBASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 NRBF2P3-201ENST00000432731 865 ntBASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 RPL21P23-201ENST00000446654 460 ntBASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 AL035090.1-201ENST00000454835 332 ntBASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 RN7SL799P-201ENST00000475891 298 ntBASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 RN7SL447P-201ENST00000494711 245 ntBASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 POU5F1P7-201ENST00000508759 541 ntBASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 NPM1P41-201ENST00000512920 831 ntBASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 SCARNA16.4-201ENST00000516956 187 ntBASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 AL049779.2-201ENST00000553847 315 ntBASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 AL049870.4-201ENST00000555741 486 ntBASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 AL022345.1-201ENST00000607292 135 ntBASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 AC109583.2-201ENST00000617367 129 ntBASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 AC009318.4-201ENST00000620496 486 ntBASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 NUP58P1-201ENST00000502546 1738 ntBASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 AC239868.2-201ENST00000564237 4527 ntBASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NEDD1Q8NHV4 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 RNU6-370P-201ENST00000411008 104 ntBASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 AP000534.2-201ENST00000412729 568 ntBASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 TMBIM7P-201ENST00000418074 855 ntBASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 AL158073.1-201ENST00000426848 1104 ntBASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 RPL34P27-201ENST00000428810 349 ntBASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 NANOGP6-201ENST00000429190 847 ntBASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 RPL12P17-201ENST00000432393 498 ntBASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 GSTM5P1-201ENST00000434751 660 ntBASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 LSM1P1-201ENST00000438629 273 ntBASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 LINC02210-201ENST00000444561 288 ntBASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 RPL7P52-201ENST00000449200 742 ntBASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 snoU13.29-201ENST00000459370 104 ntBASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 AC007547.1-201ENST00000462177 490 ntBASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 RN7SL188P-201ENST00000469842 285 ntBASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 RPL12P20-201ENST00000475538 479 ntBASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 RN7SL727P-201ENST00000482164 296 ntBASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 AC008638.1-201ENST00000506035 866 ntBASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 Y_RNA.680-201ENST00000516441 93 ntBASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 AP001189.2-201ENST00000527320 189 ntBASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 AP001180.3-201ENST00000582221 145 ntBASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 AL133338.2-201ENST00000604292 736 ntBASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 AL359999.1-201ENST00000604513 294 ntBASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 U2.1-201ENST00000618978 145 ntBASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 AC099654.6-201ENST00000636487 512 ntBASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
NEDD1Q8NHV4 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
NEDD1Q8NHV4 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms