Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 PGBD4P8-201ENST00000412993 562 ntBASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 MTCO2P34-201ENST00000421994 607 ntBASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 B3GNT2P1-201ENST00000434960 952 ntBASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 ELOCP10-201ENST00000440624 327 ntBASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 RPL26P28-201ENST00000451325 435 ntBASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 AC006499.5-201ENST00000505037 514 ntBASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 SOD1P3-201ENST00000518682 454 ntBASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 MIR3611-201ENST00000584484 83 ntBASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 AC022146.1-201ENST00000595307 847 ntBASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 AC080078.2-201ENST00000603766 501 ntBASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 ELOCP34-201ENST00000604436 327 ntBASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 AL391497.1-201ENST00000608671 547 ntBASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 MIR6839-201ENST00000620425 113 ntBASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 AC068792.1-201ENST00000621354 417 ntBASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 CR392039.5-201ENST00000623201 510 ntBASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 AC092192.1-201ENST00000633154 1018 ntBASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 ZFRP1-201ENST00000457579 2970 ntBASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
SMC1BQ8NDV3 AC021242.1-201ENST00000507315 2035 ntBASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 AC073136.1-201ENST00000449426 2884 ntBASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 RNA5SP88-201ENST00000365560 109 ntBASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 MIR491-201ENST00000384877 84 ntBASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 AC009237.2-201ENST00000421358 284 ntBASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 UBE2FP3-201ENST00000436366 524 ntBASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 MTCO1P19-201ENST00000443487 500 ntBASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 AL691482.1-201ENST00000453255 87 ntBASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 AC104763.1-201ENST00000475274 360 ntBASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 SNX5P1-201ENST00000505757 1041 ntBASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 AC108064.1-201ENST00000513791 460 ntBASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 AC008802.1-201ENST00000519121 791 ntBASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 AC060788.1-201ENST00000521318 469 ntBASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 AC074051.3-201ENST00000570238 358 ntBASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 HNRNPCP4-201ENST00000571636 900 ntBASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 AC123786.2-201ENST00000603459 275 ntBASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 AL596327.1-201ENST00000603629 213 ntBASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 AC007179.3-201ENST00000604976 235 ntBASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 RNU6-88P-201ENST00000606801 100 ntBASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 AC104073.3-201ENST00000610942 955 ntBASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 AL590240.3-201ENST00000621416 943 ntBASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 AL356266.1-201ENST00000623311 483 ntBASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 AC092104.1-201ENST00000497346 1441 ntBASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 MFSD8-242ENST00000641690 4199 ntBASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SMC1BQ8NDV3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 LINC00561-201ENST00000565815 2738 ntBASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 RNU6-374P-201ENST00000364146 108 ntBASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 RNU4-75P-201ENST00000364621 146 ntBASIC5.54□□□□□ -1.52
SMC1BQ8NDV3 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms