Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
CDKL3Q8IVW4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 AL122126.1-201ENST00000546905 1318 ntBASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 RN7SKP202-201ENST00000410439 330 ntBASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 AL445528.1-201ENST00000426330 420 ntBASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 ATP5JP1-201ENST00000431631 322 ntBASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 AL035458.1-201ENST00000433096 585 ntBASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 AC023347.2-201ENST00000433994 462 ntBASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 AL662791.1-201ENST00000441992 928 ntBASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 ARL5AP2-201ENST00000444698 533 ntBASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 Z95327.1-201ENST00000446082 482 ntBASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 HMGB3P8-201ENST00000449709 577 ntBASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 HMGN1P18-201ENST00000457642 277 ntBASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 RPL7P15-201ENST00000461190 712 ntBASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 RPL6P9-201ENST00000466502 859 ntBASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 AC093770.1-201ENST00000511559 571 ntBASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 AC093331.1-201ENST00000521474 169 ntBASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 IGHV3-76-201ENST00000522465 295 ntBASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 MTCO1P49-201ENST00000523429 802 ntBASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 AC004024.1-201ENST00000549244 247 ntBASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 AC010198.2-201ENST00000550612 259 ntBASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 AC245389.1-201ENST00000605141 529 ntBASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 AC008121.2-201ENST00000614647 523 ntBASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 LINC00216-201ENST00000623548 1126 ntBASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CDKL3Q8IVW4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 ZNF826P-207ENST00000622273 1910 ntBASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 ZNF542P-204ENST00000482727 1305 ntBASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 AL672296.1-201ENST00000427780 2158 ntBASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 RNA5SP197-201ENST00000363357 119 ntBASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 RNU6-452P-201ENST00000384406 107 ntBASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 MIR607-201ENST00000385241 96 ntBASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 RNA5SP31-201ENST00000411144 127 ntBASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 AC093578.1-201ENST00000415219 368 ntBASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 RPL31P12-201ENST00000422587 358 ntBASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 AC073063.1-201ENST00000434352 607 ntBASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 HMGB1P45-201ENST00000435986 653 ntBASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 AC006994.1-201ENST00000438212 839 ntBASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 RPS4XP13-201ENST00000483219 789 ntBASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 AC106707.2-201ENST00000484182 374 ntBASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 PAICSP4-201ENST00000517543 1253 ntBASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 OR4R3P-201ENST00000525084 838 ntBASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 MTND4LP24-201ENST00000572277 291 ntBASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 AC079791.1-201ENST00000605356 973 ntBASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 AC113194.1-201ENST00000606037 500 ntBASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 SNORA50A-202ENST00000629536 136 ntBASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 AC009093.8-201ENST00000641769 292 ntBASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 RIOK3P1-201ENST00000418778 1528 ntBASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDKL3Q8IVW4 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 SKINT1L-201ENST00000401057 817 ntBASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 FAR1P1-201ENST00000427163 934 ntBASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 AC092641.1-201ENST00000440229 772 ntBASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 RPL34P26-201ENST00000445636 354 ntBASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 RPL29P29-201ENST00000448725 423 ntBASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 RBMY2UP-201ENST00000453474 324 ntBASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 RPL23AP14-201ENST00000468281 468 ntBASIC3.47□□□□□ -1.85
CDKL3Q8IVW4 AC025518.1-201ENST00000479856 347 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms