Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
VARS2Q5ST30 AC138915.4-201ENST00000565549 4147 ntBASIC7.13□□□□□ -1.27
VARS2Q5ST30 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
VARS2Q5ST30 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC7.13□□□□□ -1.27
VARS2Q5ST30 RNU6-923P-201ENST00000364753 107 ntBASIC7.13□□□□□ -1.27
VARS2Q5ST30 RNU6-290P-201ENST00000365212 101 ntBASIC7.13□□□□□ -1.27
VARS2Q5ST30 RNU5E-6P-201ENST00000365574 115 ntBASIC7.13□□□□□ -1.27
VARS2Q5ST30 RNU6-1056P-201ENST00000383996 107 ntBASIC7.13□□□□□ -1.27
VARS2Q5ST30 Y_RNA.602-201ENST00000410535 92 ntBASIC7.13□□□□□ -1.27
VARS2Q5ST30 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC7.13□□□□□ -1.27
VARS2Q5ST30 AL590399.2-201ENST00000427536 309 ntBASIC7.13□□□□□ -1.27
VARS2Q5ST30 AC092423.1-201ENST00000430165 186 ntBASIC7.13□□□□□ -1.27
VARS2Q5ST30 AL645939.3-201ENST00000435408 225 ntBASIC7.13□□□□□ -1.27
VARS2Q5ST30 UBE2V1P13-201ENST00000436983 439 ntBASIC7.13□□□□□ -1.27
VARS2Q5ST30 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC7.13□□□□□ -1.27
VARS2Q5ST30 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC7.13□□□□□ -1.27
VARS2Q5ST30 HMGB1P25-201ENST00000468402 607 ntBASIC7.13□□□□□ -1.27
VARS2Q5ST30 RPL30P10-201ENST00000488148 337 ntBASIC7.13□□□□□ -1.27
VARS2Q5ST30 AC108078.2-201ENST00000510750 236 ntBASIC7.13□□□□□ -1.27
VARS2Q5ST30 RNU6-496P-201ENST00000516145 99 ntBASIC7.13□□□□□ -1.27
VARS2Q5ST30 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC7.13□□□□□ -1.27
VARS2Q5ST30 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC7.13□□□□□ -1.27
VARS2Q5ST30 AC026956.1-201ENST00000558741 396 ntBASIC7.13□□□□□ -1.27
VARS2Q5ST30 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC7.13□□□□□ -1.27
VARS2Q5ST30 COX6CP3-201ENST00000580869 223 ntBASIC7.13□□□□□ -1.27
VARS2Q5ST30 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC7.13□□□□□ -1.27
VARS2Q5ST30 AC114477.1-201ENST00000605097 605 ntBASIC7.13□□□□□ -1.27
VARS2Q5ST30 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.13□□□□□ -1.27
VARS2Q5ST30 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
VARS2Q5ST30 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.13□□□□□ -1.27
VARS2Q5ST30 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.13□□□□□ -1.27
VARS2Q5ST30 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
VARS2Q5ST30 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
VARS2Q5ST30 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
VARS2Q5ST30 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
VARS2Q5ST30 AC015871.3-201ENST00000618835 2261 ntBASIC7.13□□□□□ -1.27
VARS2Q5ST30 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
VARS2Q5ST30 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
VARS2Q5ST30 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC7.13□□□□□ -1.27
VARS2Q5ST30 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
VARS2Q5ST30 AC092821.2-201ENST00000545710 2042 ntBASIC7.13□□□□□ -1.27
VARS2Q5ST30 AC020658.2-201ENST00000559030 4020 ntBASIC7.13□□□□□ -1.27
VARS2Q5ST30 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
VARS2Q5ST30 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC7.13□□□□□ -1.27
VARS2Q5ST30 NCOA4P3-201ENST00000513203 1877 ntBASIC7.13□□□□□ -1.27
VARS2Q5ST30 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
VARS2Q5ST30 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
VARS2Q5ST30 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.12□□□□□ -1.27
VARS2Q5ST30 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
VARS2Q5ST30 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.12□□□□□ -1.27
VARS2Q5ST30 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.12□□□□□ -1.27
VARS2Q5ST30 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
VARS2Q5ST30 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
VARS2Q5ST30 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
VARS2Q5ST30 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
VARS2Q5ST30 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
VARS2Q5ST30 RPL12P13-201ENST00000310055 497 ntBASIC7.12□□□□□ -1.27
VARS2Q5ST30 SNORA38B-201ENST00000363524 131 ntBASIC7.12□□□□□ -1.27
VARS2Q5ST30 RNU6-80P-201ENST00000384195 107 ntBASIC7.12□□□□□ -1.27
VARS2Q5ST30 RPS4XP5-201ENST00000419038 768 ntBASIC7.12□□□□□ -1.27
VARS2Q5ST30 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.12□□□□□ -1.27
VARS2Q5ST30 AC010881.1-201ENST00000433830 235 ntBASIC7.12□□□□□ -1.27
VARS2Q5ST30 FABP5P2-201ENST00000439042 408 ntBASIC7.12□□□□□ -1.27
VARS2Q5ST30 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.12□□□□□ -1.27
VARS2Q5ST30 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC7.12□□□□□ -1.27
VARS2Q5ST30 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC7.12□□□□□ -1.27
VARS2Q5ST30 AC021205.1-201ENST00000468797 348 ntBASIC7.12□□□□□ -1.27
VARS2Q5ST30 RPL23AP71-201ENST00000470966 469 ntBASIC7.12□□□□□ -1.27
VARS2Q5ST30 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC7.12□□□□□ -1.27
VARS2Q5ST30 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC7.12□□□□□ -1.27
VARS2Q5ST30 RNA5SP272-201ENST00000516095 111 ntBASIC7.12□□□□□ -1.27
VARS2Q5ST30 RNU6-971P-201ENST00000516920 106 ntBASIC7.12□□□□□ -1.27
VARS2Q5ST30 AC112191.2-201ENST00000522428 333 ntBASIC7.12□□□□□ -1.27
VARS2Q5ST30 RN7SL270P-201ENST00000579643 281 ntBASIC7.12□□□□□ -1.27
VARS2Q5ST30 MIR4273-201ENST00000582824 84 ntBASIC7.12□□□□□ -1.27
VARS2Q5ST30 MIR4282-201ENST00000583613 67 ntBASIC7.12□□□□□ -1.27
VARS2Q5ST30 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.12□□□□□ -1.27
VARS2Q5ST30 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.12□□□□□ -1.27
VARS2Q5ST30 RN7SL261P-201ENST00000613441 282 ntBASIC7.12□□□□□ -1.27
VARS2Q5ST30 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.12□□□□□ -1.27
VARS2Q5ST30 AP001052.1-201ENST00000626421 99 ntBASIC7.12□□□□□ -1.27
VARS2Q5ST30 AL589993.1-201ENST00000407450 2524 ntBASIC7.12□□□□□ -1.27
VARS2Q5ST30 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
VARS2Q5ST30 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.12□□□□□ -1.27
VARS2Q5ST30 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.12□□□□□ -1.27
VARS2Q5ST30 AC093909.5-201ENST00000621839 1799 ntBASIC7.12□□□□□ -1.27
VARS2Q5ST30 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC7.12□□□□□ -1.27
VARS2Q5ST30 AC122713.2-201ENST00000624942 3335 ntBASIC7.12□□□□□ -1.27
VARS2Q5ST30 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
VARS2Q5ST30 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
VARS2Q5ST30 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
VARS2Q5ST30 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
VARS2Q5ST30 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
VARS2Q5ST30 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
VARS2Q5ST30 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
VARS2Q5ST30 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
VARS2Q5ST30 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VARS2Q5ST30 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VARS2Q5ST30 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VARS2Q5ST30 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms