Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AL691449.1-201ENST00000426570 421 ntBASIC4.38□□□□□ -1.71
USP41Q3LFD5 Z93242.1-201ENST00000427102 353 ntBASIC4.38□□□□□ -1.71
USP41Q3LFD5 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.38□□□□□ -1.71
USP41Q3LFD5 AC007389.2-201ENST00000434630 306 ntBASIC4.38□□□□□ -1.71
USP41Q3LFD5 FGF7P5-201ENST00000441829 291 ntBASIC4.38□□□□□ -1.71
USP41Q3LFD5 RPS15AP1-201ENST00000457423 391 ntBASIC4.38□□□□□ -1.71
USP41Q3LFD5 AC108734.3-201ENST00000481241 1165 ntBASIC4.38□□□□□ -1.71
USP41Q3LFD5 AC126121.1-201ENST00000482313 553 ntBASIC4.38□□□□□ -1.71
USP41Q3LFD5 FTH1P24-201ENST00000503502 462 ntBASIC4.38□□□□□ -1.71
USP41Q3LFD5 AC108145.1-201ENST00000503770 153 ntBASIC4.38□□□□□ -1.71
USP41Q3LFD5 AC093755.1-201ENST00000512950 1023 ntBASIC4.38□□□□□ -1.71
USP41Q3LFD5 MRPS36P3-201ENST00000519284 130 ntBASIC4.38□□□□□ -1.71
USP41Q3LFD5 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.38□□□□□ -1.71
USP41Q3LFD5 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.38□□□□□ -1.71
USP41Q3LFD5 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
USP41Q3LFD5 AC090888.2-201ENST00000559765 1144 ntBASIC4.38□□□□□ -1.71
USP41Q3LFD5 AC120057.2-201ENST00000571520 271 ntBASIC4.38□□□□□ -1.71
USP41Q3LFD5 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.38□□□□□ -1.71
USP41Q3LFD5 AC022662.1-201ENST00000580252 331 ntBASIC4.38□□□□□ -1.71
USP41Q3LFD5 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.38□□□□□ -1.71
USP41Q3LFD5 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.38□□□□□ -1.71
USP41Q3LFD5 AC005255.1-201ENST00000593748 216 ntBASIC4.38□□□□□ -1.71
USP41Q3LFD5 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.38□□□□□ -1.71
USP41Q3LFD5 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.38□□□□□ -1.71
USP41Q3LFD5 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.38□□□□□ -1.71
USP41Q3LFD5 AL031666.3-201ENST00000609320 1006 ntBASIC4.38□□□□□ -1.71
USP41Q3LFD5 AC243756.2-201ENST00000618406 463 ntBASIC4.38□□□□□ -1.71
USP41Q3LFD5 AL356121.2-201ENST00000624715 780 ntBASIC4.38□□□□□ -1.71
USP41Q3LFD5 OR5BE1P-202ENST00000641168 1176 ntBASIC4.38□□□□□ -1.71
USP41Q3LFD5 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP41Q3LFD5 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP41Q3LFD5 Z82217.1-201ENST00000625157 8149 ntBASIC4.38□□□□□ -1.71
USP41Q3LFD5 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
USP41Q3LFD5 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
USP41Q3LFD5 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.38□□□□□ -1.71
USP41Q3LFD5 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP41Q3LFD5 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
USP41Q3LFD5 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP41Q3LFD5 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USP41Q3LFD5 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
USP41Q3LFD5 RNU6-1300P-201ENST00000391046 108 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP41Q3LFD5 AL139098.1-201ENST00000407291 389 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 RNU6ATAC-201ENST00000408749 126 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 MRPS36P1-201ENST00000421291 307 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.37□□□□□ -1.71
USP41Q3LFD5 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 HIGD1AP4-201ENST00000430194 280 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.37□□□□□ -1.71
USP41Q3LFD5 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 AC010881.1-201ENST00000433830 235 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.37□□□□□ -1.71
USP41Q3LFD5 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.37□□□□□ -1.71
USP41Q3LFD5 COX7BP2-201ENST00000437976 242 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 RPS4XP4-201ENST00000443195 763 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.37□□□□□ -1.71
USP41Q3LFD5 Z99714.1-201ENST00000450463 807 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 NDUFA5P7-201ENST00000452914 242 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.37□□□□□ -1.71
USP41Q3LFD5 NF1P3-201ENST00000457709 450 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.37□□□□□ -1.71
USP41Q3LFD5 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.37□□□□□ -1.71
USP41Q3LFD5 AC008837.2-201ENST00000513076 418 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.37□□□□□ -1.71
USP41Q3LFD5 RNU6-488P-201ENST00000515918 99 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 AC087808.1-201ENST00000520501 361 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 OR5M7P-201ENST00000526140 972 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 AC063950.1-201ENST00000552036 308 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.37□□□□□ -1.71
USP41Q3LFD5 HSPE1P5-201ENST00000561489 272 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 CYP4A43P-201ENST00000568156 121 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.37□□□□□ -1.71
USP41Q3LFD5 MIR5685-201ENST00000579080 79 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 MIR4512-201ENST00000583257 77 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 NIFKP6-201ENST00000598115 845 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 ELOCP35-201ENST00000604289 336 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 AC107075.1-201ENST00000613695 314 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
USP41Q3LFD5 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.37□□□□□ -1.71
USP41Q3LFD5 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
USP41Q3LFD5 OR8B1P-202ENST00000641132 1178 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.37□□□□□ -1.71
USP41Q3LFD5 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USP41Q3LFD5 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP41Q3LFD5 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USP41Q3LFD5 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USP41Q3LFD5 AC016588.2-201ENST00000632484 3021 ntBASIC4.37□□□□□ -1.71
USP41Q3LFD5 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.37□□□□□ -1.71
USP41Q3LFD5 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.37□□□□□ -1.71
USP41Q3LFD5 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
USP41Q3LFD5 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.36□□□□□ -1.71
USP41Q3LFD5 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
USP41Q3LFD5 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
USP41Q3LFD5 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
USP41Q3LFD5 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.36□□□□□ -1.71
USP41Q3LFD5 FAM91A3P-201ENST00000456826 2544 ntBASIC4.36□□□□□ -1.71
USP41Q3LFD5 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
USP41Q3LFD5 AC011266.1-201ENST00000624119 3569 ntBASIC4.36□□□□□ -1.71
USP41Q3LFD5 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
USP41Q3LFD5 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms