Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RNU6-583P-201ENST00000516012 92 ntBASIC4.77□□□□□ -1.65
COPAP53621 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.77□□□□□ -1.65
COPAP53621 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.77□□□□□ -1.65
COPAP53621 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.77□□□□□ -1.65
COPAP53621 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.77□□□□□ -1.65
COPAP53621 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.77□□□□□ -1.65
COPAP53621 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.77□□□□□ -1.65
COPAP53621 AL121766.1-201ENST00000547436 487 ntBASIC4.77□□□□□ -1.65
COPAP53621 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.77□□□□□ -1.65
COPAP53621 LSM6P2-201ENST00000552208 177 ntBASIC4.77□□□□□ -1.65
COPAP53621 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.77□□□□□ -1.65
COPAP53621 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.77□□□□□ -1.65
COPAP53621 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.77□□□□□ -1.65
COPAP53621 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.77□□□□□ -1.65
COPAP53621 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.77□□□□□ -1.65
COPAP53621 MIR4277-201ENST00000578298 84 ntBASIC4.77□□□□□ -1.65
COPAP53621 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COPAP53621 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.77□□□□□ -1.65
COPAP53621 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.77□□□□□ -1.65
COPAP53621 AC004987.4-201ENST00000603383 338 ntBASIC4.77□□□□□ -1.65
COPAP53621 AC018714.1-201ENST00000605028 208 ntBASIC4.77□□□□□ -1.65
COPAP53621 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.77□□□□□ -1.65
COPAP53621 AC008443.7-201ENST00000622195 246 ntBASIC4.77□□□□□ -1.65
COPAP53621 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.77□□□□□ -1.65
COPAP53621 Z69908.1-201ENST00000622603 247 ntBASIC4.77□□□□□ -1.65
COPAP53621 AC005086.4-201ENST00000623065 213 ntBASIC4.77□□□□□ -1.65
COPAP53621 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
COPAP53621 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.77□□□□□ -1.65
COPAP53621 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
COPAP53621 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COPAP53621 AC117529.2-201ENST00000512159 2068 ntBASIC4.77□□□□□ -1.65
COPAP53621 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COPAP53621 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
COPAP53621 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COPAP53621 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COPAP53621 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.76□□□□□ -1.65
COPAP53621 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
COPAP53621 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.76□□□□□ -1.65
COPAP53621 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COPAP53621 AC011477.1-204ENST00000623416 1325 ntBASIC4.76□□□□□ -1.65
COPAP53621 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COPAP53621 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COPAP53621 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COPAP53621 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.76□□□□□ -1.65
COPAP53621 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
COPAP53621 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
COPAP53621 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
COPAP53621 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
COPAP53621 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COPAP53621 SNRPEP3-201ENST00000338402 276 ntBASIC4.76□□□□□ -1.65
COPAP53621 Y_RNA.77-201ENST00000362962 107 ntBASIC4.76□□□□□ -1.65
COPAP53621 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.76□□□□□ -1.65
COPAP53621 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.76□□□□□ -1.65
COPAP53621 Y_RNA.436-201ENST00000384097 102 ntBASIC4.76□□□□□ -1.65
COPAP53621 RPS3AP26-201ENST00000398259 784 ntBASIC4.76□□□□□ -1.65
COPAP53621 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COPAP53621 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COPAP53621 PIGPP2-201ENST00000411569 458 ntBASIC4.76□□□□□ -1.65
COPAP53621 BTF3L4P1-201ENST00000413813 468 ntBASIC4.76□□□□□ -1.65
COPAP53621 CHIAP3-201ENST00000423668 1133 ntBASIC4.76□□□□□ -1.65
COPAP53621 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COPAP53621 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.76□□□□□ -1.65
COPAP53621 AC129850.1-201ENST00000436203 508 ntBASIC4.76□□□□□ -1.65
COPAP53621 MTCYBP39-201ENST00000437562 491 ntBASIC4.76□□□□□ -1.65
COPAP53621 AC004938.1-201ENST00000438468 308 ntBASIC4.76□□□□□ -1.65
COPAP53621 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.76□□□□□ -1.65
COPAP53621 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.76□□□□□ -1.65
COPAP53621 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.76□□□□□ -1.65
COPAP53621 TPTE2P5-203ENST00000458118 728 ntBASIC4.76□□□□□ -1.65
COPAP53621 AC092757.1-201ENST00000467293 467 ntBASIC4.76□□□□□ -1.65
COPAP53621 AC072039.1-201ENST00000477611 581 ntBASIC4.76□□□□□ -1.65
COPAP53621 AC013356.1-201ENST00000489027 564 ntBASIC4.76□□□□□ -1.65
COPAP53621 AC012170.1-201ENST00000495139 359 ntBASIC4.76□□□□□ -1.65
COPAP53621 AC108078.3-201ENST00000502633 489 ntBASIC4.76□□□□□ -1.65
COPAP53621 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.76□□□□□ -1.65
COPAP53621 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.76□□□□□ -1.65
COPAP53621 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.76□□□□□ -1.65
COPAP53621 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COPAP53621 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.76□□□□□ -1.65
COPAP53621 ACTR3BP3-201ENST00000565577 979 ntBASIC4.76□□□□□ -1.65
COPAP53621 MTCYBP28-201ENST00000566728 1132 ntBASIC4.76□□□□□ -1.65
COPAP53621 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.76□□□□□ -1.65
COPAP53621 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.76□□□□□ -1.65
COPAP53621 AL031985.2-201ENST00000600955 480 ntBASIC4.76□□□□□ -1.65
COPAP53621 AF131215.7-201ENST00000602443 707 ntBASIC4.76□□□□□ -1.65
COPAP53621 AC073114.1-201ENST00000612027 490 ntBASIC4.76□□□□□ -1.65
COPAP53621 AL121873.1-201ENST00000616013 524 ntBASIC4.76□□□□□ -1.65
COPAP53621 AC091965.5-201ENST00000624785 342 ntBASIC4.76□□□□□ -1.65
COPAP53621 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.76□□□□□ -1.65
COPAP53621 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
COPAP53621 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
COPAP53621 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
COPAP53621 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COPAP53621 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.76□□□□□ -1.65
COPAP53621 MTND5P28-201ENST00000438005 1594 ntBASIC4.75□□□□□ -1.65
COPAP53621 MTCO1P14-201ENST00000441695 1559 ntBASIC4.75□□□□□ -1.65
COPAP53621 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COPAP53621 MIR124-3-201ENST00000384866 87 ntBASIC4.75□□□□□ -1.65
COPAP53621 MIR195-201ENST00000385194 87 ntBASIC4.75□□□□□ -1.65
COPAP53621 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms