Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC012123.2-201ENST00000485809 248 ntBASIC3.21□□□□□ -1.9
CENPFP49454 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.21□□□□□ -1.9
CENPFP49454 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.21□□□□□ -1.9
CENPFP49454 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.21□□□□□ -1.9
CENPFP49454 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CENPFP49454 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CENPFP49454 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.2□□□□□ -1.9
CENPFP49454 AC233309.1-201ENST00000619522 751 ntBASIC3.2□□□□□ -1.9
CENPFP49454 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CENPFP49454 AC026634.1-201ENST00000634369 198 ntBASIC3.2□□□□□ -1.9
CENPFP49454 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CENPFP49454 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC3.2□□□□□ -1.9
CENPFP49454 AC087190.4-201ENST00000574616 8334 ntBASIC3.2□□□□□ -1.9
CENPFP49454 HMGN2P8-201ENST00000391458 268 ntBASIC3.2□□□□□ -1.9
CENPFP49454 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.2□□□□□ -1.9
CENPFP49454 AC008280.2-201ENST00000455473 307 ntBASIC3.2□□□□□ -1.9
CENPFP49454 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.2□□□□□ -1.9
CENPFP49454 AP001646.1-201ENST00000527936 915 ntBASIC3.2□□□□□ -1.9
CENPFP49454 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.2□□□□□ -1.9
CENPFP49454 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.2□□□□□ -1.9
CENPFP49454 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CENPFP49454 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CENPFP49454 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CENPFP49454 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC3.2□□□□□ -1.9
CENPFP49454 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CENPFP49454 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
CENPFP49454 AL356057.3-201ENST00000402607 340 ntBASIC3.19□□□□□ -1.9
CENPFP49454 RANP4-201ENST00000413361 655 ntBASIC3.19□□□□□ -1.9
CENPFP49454 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CENPFP49454 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.19□□□□□ -1.9
CENPFP49454 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CENPFP49454 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CENPFP49454 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CENPFP49454 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CENPFP49454 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CENPFP49454 AL049555.1-201ENST00000562834 1933 ntBASIC3.19□□□□□ -1.9
CENPFP49454 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.19□□□□□ -1.9
CENPFP49454 AC118273.1-201ENST00000525324 3006 ntBASIC3.19□□□□□ -1.9
CENPFP49454 SNORA31.21-201ENST00000517180 77 ntBASIC3.19□□□□□ -1.9
CENPFP49454 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.19□□□□□ -1.9
CENPFP49454 AC017071.1-201ENST00000564407 2204 ntBASIC3.19□□□□□ -1.9
CENPFP49454 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
CENPFP49454 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
CENPFP49454 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.19□□□□□ -1.9
CENPFP49454 AC009948.4-201ENST00000604692 675 ntBASIC3.19□□□□□ -1.9
CENPFP49454 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CENPFP49454 AC073476.4-201ENST00000628409 72 ntBASIC3.19□□□□□ -1.9
CENPFP49454 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CENPFP49454 AP006437.1-201ENST00000641440 3685 ntBASIC3.18□□□□□ -1.9
CENPFP49454 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CENPFP49454 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CENPFP49454 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CENPFP49454 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CENPFP49454 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.18□□□□□ -1.9
CENPFP49454 RN7SKP192-201ENST00000411291 327 ntBASIC3.18□□□□□ -1.9
CENPFP49454 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.18□□□□□ -1.9
CENPFP49454 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.18□□□□□ -1.9
CENPFP49454 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.18□□□□□ -1.9
CENPFP49454 MRPS31P2-201ENST00000451581 518 ntBASIC3.18□□□□□ -1.9
CENPFP49454 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.18□□□□□ -1.9
CENPFP49454 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.18□□□□□ -1.9
CENPFP49454 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CENPFP49454 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CENPFP49454 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CENPFP49454 AC018555.1-201ENST00000567548 1980 ntBASIC3.18□□□□□ -1.9
CENPFP49454 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CENPFP49454 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC3.18□□□□□ -1.9
CENPFP49454 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CENPFP49454 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.18□□□□□ -1.9
CENPFP49454 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.18□□□□□ -1.9
CENPFP49454 GAPDHP39-201ENST00000481866 979 ntBASIC3.18□□□□□ -1.9
CENPFP49454 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.18□□□□□ -1.9
CENPFP49454 AL365400.2-201ENST00000605604 902 ntBASIC3.18□□□□□ -1.9
CENPFP49454 AC015813.4-201ENST00000610469 179 ntBASIC3.18□□□□□ -1.9
CENPFP49454 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CENPFP49454 KPNA2P2-201ENST00000419546 1489 ntBASIC3.18□□□□□ -1.9
CENPFP49454 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CENPFP49454 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CENPFP49454 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CENPFP49454 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.18□□□□□ -1.9
CENPFP49454 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CENPFP49454 SNORD114-30-201ENST00000364448 72 ntBASIC3.17□□□□□ -1.9
CENPFP49454 NPM1P29-201ENST00000483112 803 ntBASIC3.17□□□□□ -1.9
CENPFP49454 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CENPFP49454 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CENPFP49454 AC110754.1-201ENST00000399740 601 ntBASIC3.17□□□□□ -1.9
CENPFP49454 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.17□□□□□ -1.9
CENPFP49454 AC124916.1-201ENST00000444020 547 ntBASIC3.17□□□□□ -1.9
CENPFP49454 Z99127.3-201ENST00000448158 395 ntBASIC3.17□□□□□ -1.9
CENPFP49454 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.17□□□□□ -1.9
CENPFP49454 RNA5SP148-201ENST00000516527 94 ntBASIC3.17□□□□□ -1.9
CENPFP49454 AP001636.2-201ENST00000525517 696 ntBASIC3.17□□□□□ -1.9
CENPFP49454 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.17□□□□□ -1.9
CENPFP49454 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.17□□□□□ -1.9
CENPFP49454 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CENPFP49454 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CENPFP49454 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.17□□□□□ -1.9
CENPFP49454 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC3.17□□□□□ -1.9
CENPFP49454 RPL12P26-201ENST00000452430 487 ntBASIC3.17□□□□□ -1.9
CENPFP49454 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms