Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 NOTCH2P1-201ENST00000443481 624 ntBASIC4.08□□□□□ -1.76
LHX1P48742 AL009048.1-201ENST00000450437 298 ntBASIC4.08□□□□□ -1.76
LHX1P48742 Z99714.1-201ENST00000450463 807 ntBASIC4.08□□□□□ -1.76
LHX1P48742 AL162388.1-201ENST00000450912 352 ntBASIC4.08□□□□□ -1.76
LHX1P48742 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.08□□□□□ -1.76
LHX1P48742 RN7SL542P-201ENST00000467147 294 ntBASIC4.08□□□□□ -1.76
LHX1P48742 RPS6P4-201ENST00000494693 758 ntBASIC4.08□□□□□ -1.76
LHX1P48742 AC025445.1-201ENST00000502728 300 ntBASIC4.08□□□□□ -1.76
LHX1P48742 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.08□□□□□ -1.76
LHX1P48742 SCARNA14-201ENST00000516903 136 ntBASIC4.08□□□□□ -1.76
LHX1P48742 RNU1-45P-201ENST00000517191 141 ntBASIC4.08□□□□□ -1.76
LHX1P48742 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.08□□□□□ -1.76
LHX1P48742 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.08□□□□□ -1.76
LHX1P48742 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LHX1P48742 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
LHX1P48742 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.08□□□□□ -1.76
LHX1P48742 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.08□□□□□ -1.76
LHX1P48742 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.08□□□□□ -1.76
LHX1P48742 AL161713.1-201ENST00000555538 145 ntBASIC4.08□□□□□ -1.76
LHX1P48742 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.08□□□□□ -1.76
LHX1P48742 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.08□□□□□ -1.76
LHX1P48742 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.08□□□□□ -1.76
LHX1P48742 AC067852.4-201ENST00000590314 478 ntBASIC4.08□□□□□ -1.76
LHX1P48742 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.08□□□□□ -1.76
LHX1P48742 RPP40P2-201ENST00000603596 712 ntBASIC4.08□□□□□ -1.76
LHX1P48742 AC112230.1-201ENST00000604342 547 ntBASIC4.08□□□□□ -1.76
LHX1P48742 RMST_9.1-201ENST00000619945 193 ntBASIC4.08□□□□□ -1.76
LHX1P48742 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.08□□□□□ -1.76
LHX1P48742 MFSD8-245ENST00000641743 948 ntBASIC4.08□□□□□ -1.76
LHX1P48742 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LHX1P48742 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
LHX1P48742 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
LHX1P48742 ZNF962P-201ENST00000443465 3140 ntBASIC4.07□□□□□ -1.76
LHX1P48742 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.07□□□□□ -1.76
LHX1P48742 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.07□□□□□ -1.76
LHX1P48742 ZNF29P-201ENST00000225587 168 ntBASIC4.07□□□□□ -1.76
LHX1P48742 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LHX1P48742 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
LHX1P48742 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
LHX1P48742 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
LHX1P48742 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.07□□□□□ -1.76
LHX1P48742 AC008280.1-201ENST00000418851 412 ntBASIC4.07□□□□□ -1.76
LHX1P48742 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.07□□□□□ -1.76
LHX1P48742 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.07□□□□□ -1.76
LHX1P48742 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.07□□□□□ -1.76
LHX1P48742 RPF2P1-201ENST00000424137 906 ntBASIC4.07□□□□□ -1.76
LHX1P48742 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.07□□□□□ -1.76
LHX1P48742 NPM1P34-201ENST00000428821 893 ntBASIC4.07□□□□□ -1.76
LHX1P48742 AL035246.1-201ENST00000433554 1255 ntBASIC4.07□□□□□ -1.76
LHX1P48742 SETD6P1-201ENST00000444575 317 ntBASIC4.07□□□□□ -1.76
LHX1P48742 NANOGP10-201ENST00000453325 895 ntBASIC4.07□□□□□ -1.76
LHX1P48742 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.07□□□□□ -1.76
LHX1P48742 snoU13.7-201ENST00000459220 104 ntBASIC4.07□□□□□ -1.76
LHX1P48742 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.07□□□□□ -1.76
LHX1P48742 DYNLL1P6-201ENST00000503440 264 ntBASIC4.07□□□□□ -1.76
LHX1P48742 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.07□□□□□ -1.76
LHX1P48742 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.07□□□□□ -1.76
LHX1P48742 RNA5SP135-201ENST00000517019 125 ntBASIC4.07□□□□□ -1.76
LHX1P48742 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.07□□□□□ -1.76
LHX1P48742 AC022695.1-201ENST00000522089 237 ntBASIC4.07□□□□□ -1.76
LHX1P48742 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.07□□□□□ -1.76
LHX1P48742 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.07□□□□□ -1.76
LHX1P48742 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LHX1P48742 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.07□□□□□ -1.76
LHX1P48742 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.07□□□□□ -1.76
LHX1P48742 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.07□□□□□ -1.76
LHX1P48742 MIR4458-201ENST00000578872 75 ntBASIC4.07□□□□□ -1.76
LHX1P48742 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.07□□□□□ -1.76
LHX1P48742 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.07□□□□□ -1.76
LHX1P48742 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.07□□□□□ -1.76
LHX1P48742 AP003973.1-201ENST00000604639 691 ntBASIC4.07□□□□□ -1.76
LHX1P48742 AC091046.2-201ENST00000620775 665 ntBASIC4.07□□□□□ -1.76
LHX1P48742 AC023510.2-201ENST00000622162 746 ntBASIC4.07□□□□□ -1.76
LHX1P48742 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.07□□□□□ -1.76
LHX1P48742 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.07□□□□□ -1.76
LHX1P48742 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LHX1P48742 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
LHX1P48742 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LHX1P48742 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.06□□□□□ -1.76
LHX1P48742 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LHX1P48742 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LHX1P48742 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.06□□□□□ -1.76
LHX1P48742 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LHX1P48742 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
LHX1P48742 RNU6-839P-201ENST00000363347 108 ntBASIC4.06□□□□□ -1.76
LHX1P48742 RNU6-707P-201ENST00000364647 95 ntBASIC4.06□□□□□ -1.76
LHX1P48742 RNU2-21P-201ENST00000410368 188 ntBASIC4.06□□□□□ -1.76
LHX1P48742 RN7SKP27-201ENST00000410684 333 ntBASIC4.06□□□□□ -1.76
LHX1P48742 JKAMPP1-201ENST00000413804 919 ntBASIC4.06□□□□□ -1.76
LHX1P48742 AC004987.3-201ENST00000413879 771 ntBASIC4.06□□□□□ -1.76
LHX1P48742 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LHX1P48742 Z75741.2-201ENST00000417272 1167 ntBASIC4.06□□□□□ -1.76
LHX1P48742 AC092647.1-201ENST00000420654 287 ntBASIC4.06□□□□□ -1.76
LHX1P48742 AL139247.1-201ENST00000422768 325 ntBASIC4.06□□□□□ -1.76
LHX1P48742 AC233981.1-201ENST00000423224 461 ntBASIC4.06□□□□□ -1.76
LHX1P48742 NANOGP5-201ENST00000424456 877 ntBASIC4.06□□□□□ -1.76
LHX1P48742 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.06□□□□□ -1.76
LHX1P48742 MTCO1P3-201ENST00000429327 192 ntBASIC4.06□□□□□ -1.76
LHX1P48742 AL445584.1-201ENST00000431451 330 ntBASIC4.06□□□□□ -1.76
LHX1P48742 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms