Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.71□□□□□ -1.82
CASQ1P31415 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.71□□□□□ -1.82
CASQ1P31415 RNU1-30P-201ENST00000606575 163 ntBASIC3.71□□□□□ -1.82
CASQ1P31415 Mico1.1-201ENST00000611698 204 ntBASIC3.71□□□□□ -1.82
CASQ1P31415 AP003355.3-201ENST00000623465 114 ntBASIC3.71□□□□□ -1.82
CASQ1P31415 AC112484.5-201ENST00000624189 228 ntBASIC3.71□□□□□ -1.82
CASQ1P31415 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CASQ1P31415 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CASQ1P31415 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.71□□□□□ -1.82
CASQ1P31415 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.7□□□□□ -1.82
CASQ1P31415 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.7□□□□□ -1.82
CASQ1P31415 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.7□□□□□ -1.82
CASQ1P31415 RPL7P60-201ENST00000397636 735 ntBASIC3.7□□□□□ -1.82
CASQ1P31415 RN7SKP123-201ENST00000410732 291 ntBASIC3.7□□□□□ -1.82
CASQ1P31415 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.7□□□□□ -1.82
CASQ1P31415 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.7□□□□□ -1.82
CASQ1P31415 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CASQ1P31415 AL591419.1-201ENST00000427423 339 ntBASIC3.7□□□□□ -1.82
CASQ1P31415 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.7□□□□□ -1.82
CASQ1P31415 HMGB3P11-201ENST00000440127 604 ntBASIC3.7□□□□□ -1.82
CASQ1P31415 AC097262.1-201ENST00000452559 548 ntBASIC3.7□□□□□ -1.82
CASQ1P31415 OR5H3P-201ENST00000502817 919 ntBASIC3.7□□□□□ -1.82
CASQ1P31415 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.7□□□□□ -1.82
CASQ1P31415 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.7□□□□□ -1.82
CASQ1P31415 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.7□□□□□ -1.82
CASQ1P31415 SNORA31.9-201ENST00000516429 84 ntBASIC3.7□□□□□ -1.82
CASQ1P31415 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.7□□□□□ -1.82
CASQ1P31415 AP000619.3-201ENST00000535634 1127 ntBASIC3.7□□□□□ -1.82
CASQ1P31415 AC107954.1-201ENST00000565906 727 ntBASIC3.7□□□□□ -1.82
CASQ1P31415 AC009303.3-201ENST00000591103 736 ntBASIC3.7□□□□□ -1.82
CASQ1P31415 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.7□□□□□ -1.82
CASQ1P31415 AP000346.3-201ENST00000622821 210 ntBASIC3.7□□□□□ -1.82
CASQ1P31415 FP236240.3-201ENST00000623061 327 ntBASIC3.7□□□□□ -1.82
CASQ1P31415 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.7□□□□□ -1.82
CASQ1P31415 OR52H1-202ENST00000641796 1061 ntBASIC3.7□□□□□ -1.82
CASQ1P31415 AC012618.3-205ENST00000637896 1496 ntBASIC3.7□□□□□ -1.82
CASQ1P31415 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CASQ1P31415 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CASQ1P31415 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CASQ1P31415 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.7□□□□□ -1.82
CASQ1P31415 AL136520.1-201ENST00000600311 1322 ntBASIC3.7□□□□□ -1.82
CASQ1P31415 MFSD8-233ENST00000641482 4860 ntBASIC3.69□□□□□ -1.82
CASQ1P31415 ELL2P4-201ENST00000446870 1376 ntBASIC3.69□□□□□ -1.82
CASQ1P31415 AC017071.1-201ENST00000564407 2204 ntBASIC3.69□□□□□ -1.82
CASQ1P31415 U3.11-201ENST00000364476 212 ntBASIC3.69□□□□□ -1.82
CASQ1P31415 RNU6-837P-201ENST00000391056 108 ntBASIC3.69□□□□□ -1.82
CASQ1P31415 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.69□□□□□ -1.82
CASQ1P31415 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.69□□□□□ -1.82
CASQ1P31415 AC006960.1-201ENST00000419980 153 ntBASIC3.69□□□□□ -1.82
CASQ1P31415 AL139247.1-201ENST00000422768 325 ntBASIC3.69□□□□□ -1.82
CASQ1P31415 AC009480.2-201ENST00000422916 432 ntBASIC3.69□□□□□ -1.82
CASQ1P31415 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.69□□□□□ -1.82
CASQ1P31415 OR8F1P-201ENST00000425243 930 ntBASIC3.69□□□□□ -1.82
CASQ1P31415 UBE2V1P1-201ENST00000430836 445 ntBASIC3.69□□□□□ -1.82
CASQ1P31415 RPL7P29-201ENST00000437151 728 ntBASIC3.69□□□□□ -1.82
CASQ1P31415 AL772161.1-201ENST00000439130 476 ntBASIC3.69□□□□□ -1.82
CASQ1P31415 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.69□□□□□ -1.82
CASQ1P31415 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.69□□□□□ -1.82
CASQ1P31415 AC008264.1-201ENST00000447612 367 ntBASIC3.69□□□□□ -1.82
CASQ1P31415 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.69□□□□□ -1.82
CASQ1P31415 RPL21P18-201ENST00000469899 480 ntBASIC3.69□□□□□ -1.82
CASQ1P31415 AL136126.1-201ENST00000473603 402 ntBASIC3.69□□□□□ -1.82
CASQ1P31415 SNORA31.26-201ENST00000517250 137 ntBASIC3.69□□□□□ -1.82
CASQ1P31415 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.69□□□□□ -1.82
CASQ1P31415 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.69□□□□□ -1.82
CASQ1P31415 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.69□□□□□ -1.82
CASQ1P31415 AP001029.3-201ENST00000588063 596 ntBASIC3.69□□□□□ -1.82
CASQ1P31415 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.69□□□□□ -1.82
CASQ1P31415 BNIP3P7-201ENST00000605641 516 ntBASIC3.69□□□□□ -1.82
CASQ1P31415 AC024023.1-201ENST00000624530 922 ntBASIC3.69□□□□□ -1.82
CASQ1P31415 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CASQ1P31415 AC092435.3-201ENST00000565538 3654 ntBASIC3.69□□□□□ -1.82
CASQ1P31415 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CASQ1P31415 AC010733.2-201ENST00000589496 5702 ntBASIC3.69□□□□□ -1.82
CASQ1P31415 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.69□□□□□ -1.82
CASQ1P31415 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CASQ1P31415 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CASQ1P31415 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CASQ1P31415 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CASQ1P31415 FRG1CP-201ENST00000358464 769 ntBASIC3.68□□□□□ -1.82
CASQ1P31415 CYB5AP4-201ENST00000396692 399 ntBASIC3.68□□□□□ -1.82
CASQ1P31415 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.68□□□□□ -1.82
CASQ1P31415 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.68□□□□□ -1.82
CASQ1P31415 GAPDHP27-201ENST00000447427 1020 ntBASIC3.68□□□□□ -1.82
CASQ1P31415 AC087879.1-201ENST00000474343 374 ntBASIC3.68□□□□□ -1.82
CASQ1P31415 AC017015.1-201ENST00000477387 286 ntBASIC3.68□□□□□ -1.82
CASQ1P31415 AC005726.1-201ENST00000494679 427 ntBASIC3.68□□□□□ -1.82
CASQ1P31415 SUMO1P1-201ENST00000497904 306 ntBASIC3.68□□□□□ -1.82
CASQ1P31415 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.68□□□□□ -1.82
CASQ1P31415 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.68□□□□□ -1.82
CASQ1P31415 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.68□□□□□ -1.82
CASQ1P31415 MRPL49P2-201ENST00000521066 465 ntBASIC3.68□□□□□ -1.82
CASQ1P31415 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.68□□□□□ -1.82
CASQ1P31415 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.68□□□□□ -1.82
CASQ1P31415 CYCSP30-201ENST00000546447 172 ntBASIC3.68□□□□□ -1.82
CASQ1P31415 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.68□□□□□ -1.82
CASQ1P31415 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.68□□□□□ -1.82
CASQ1P31415 AC137768.1-201ENST00000549998 553 ntBASIC3.68□□□□□ -1.82
CASQ1P31415 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.68□□□□□ -1.82
CASQ1P31415 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms