Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH3P22223 MTND3P13-201ENST00000574391 343 ntBASIC4.02□□□□□ -1.77
CDH3P22223 MIR3160-1-201ENST00000577972 85 ntBASIC4.02□□□□□ -1.77
CDH3P22223 AC015688.2-201ENST00000584523 262 ntBASIC4.02□□□□□ -1.77
CDH3P22223 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH3P22223 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH3P22223 VN1R83P-201ENST00000595685 445 ntBASIC4.02□□□□□ -1.77
CDH3P22223 AC091488.1-201ENST00000604239 660 ntBASIC4.02□□□□□ -1.77
CDH3P22223 AC067959.1-201ENST00000604334 379 ntBASIC4.02□□□□□ -1.77
CDH3P22223 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH3P22223 RNU4-89P-201ENST00000607443 133 ntBASIC4.02□□□□□ -1.77
CDH3P22223 MIR486-1-201ENST00000612171 68 ntBASIC4.02□□□□□ -1.77
CDH3P22223 AL592148.2-201ENST00000612210 372 ntBASIC4.02□□□□□ -1.77
CDH3P22223 AC006386.1-201ENST00000619436 415 ntBASIC4.02□□□□□ -1.77
CDH3P22223 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CDH3P22223 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH3P22223 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH3P22223 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.02□□□□□ -1.77
CDH3P22223 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDH3P22223 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDH3P22223 AL133383.2-201ENST00000622958 2336 ntBASIC4.01□□□□□ -1.77
CDH3P22223 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH3P22223 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.01□□□□□ -1.77
CDH3P22223 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDH3P22223 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.01□□□□□ -1.77
CDH3P22223 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CDH3P22223 RNA5SP130-201ENST00000364431 114 ntBASIC4.01□□□□□ -1.77
CDH3P22223 RNU6-1242P-201ENST00000391052 103 ntBASIC4.01□□□□□ -1.77
CDH3P22223 RNU11-4P-201ENST00000391149 133 ntBASIC4.01□□□□□ -1.77
CDH3P22223 ENSAP1-201ENST00000392855 326 ntBASIC4.01□□□□□ -1.77
CDH3P22223 AL136310.1-201ENST00000404926 654 ntBASIC4.01□□□□□ -1.77
CDH3P22223 RNU6-272P-201ENST00000411028 104 ntBASIC4.01□□□□□ -1.77
CDH3P22223 AC004987.3-201ENST00000413879 771 ntBASIC4.01□□□□□ -1.77
CDH3P22223 OR4K6P-201ENST00000416478 897 ntBASIC4.01□□□□□ -1.77
CDH3P22223 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH3P22223 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.01□□□□□ -1.77
CDH3P22223 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH3P22223 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH3P22223 OR4C10P-201ENST00000434991 931 ntBASIC4.01□□□□□ -1.77
CDH3P22223 AL356535.1-201ENST00000440335 398 ntBASIC4.01□□□□□ -1.77
CDH3P22223 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH3P22223 HMGN2P21-201ENST00000447764 270 ntBASIC4.01□□□□□ -1.77
CDH3P22223 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH3P22223 RNA5SP246-201ENST00000458909 119 ntBASIC4.01□□□□□ -1.77
CDH3P22223 AC146507.1-201ENST00000468335 354 ntBASIC4.01□□□□□ -1.77
CDH3P22223 AC092451.1-201ENST00000480211 153 ntBASIC4.01□□□□□ -1.77
CDH3P22223 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.01□□□□□ -1.77
CDH3P22223 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH3P22223 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.01□□□□□ -1.77
CDH3P22223 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH3P22223 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.01□□□□□ -1.77
CDH3P22223 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH3P22223 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH3P22223 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH3P22223 MIR5708-201ENST00000579723 85 ntBASIC4.01□□□□□ -1.77
CDH3P22223 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH3P22223 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.01□□□□□ -1.77
CDH3P22223 AC244505.7-201ENST00000599675 272 ntBASIC4.01□□□□□ -1.77
CDH3P22223 MTND3P19-201ENST00000603825 345 ntBASIC4.01□□□□□ -1.77
CDH3P22223 AC069304.3-201ENST00000603938 1084 ntBASIC4.01□□□□□ -1.77
CDH3P22223 AL034351.1-201ENST00000605288 668 ntBASIC4.01□□□□□ -1.77
CDH3P22223 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH3P22223 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDH3P22223 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH3P22223 OR1S1-201ENST00000624470 978 ntBASIC4.01□□□□□ -1.77
CDH3P22223 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH3P22223 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.01□□□□□ -1.77
CDH3P22223 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH3P22223 AC087821.2-201ENST00000637086 450 ntBASIC4.01□□□□□ -1.77
CDH3P22223 MFSD8-245ENST00000641743 948 ntBASIC4.01□□□□□ -1.77
CDH3P22223 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDH3P22223 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDH3P22223 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CDH3P22223 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDH3P22223 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.01□□□□□ -1.77
CDH3P22223 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDH3P22223 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
CDH3P22223 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDH3P22223 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4□□□□□ -1.77
CDH3P22223 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDH3P22223 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4□□□□□ -1.77
CDH3P22223 OR11H4-201ENST00000315409 1082 ntBASIC4□□□□□ -1.77
CDH3P22223 RNU4-68P-201ENST00000364314 141 ntBASIC4□□□□□ -1.77
CDH3P22223 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CDH3P22223 SNORA70E-201ENST00000384492 135 ntBASIC4□□□□□ -1.77
CDH3P22223 RNU6-1151P-201ENST00000384684 107 ntBASIC4□□□□□ -1.77
CDH3P22223 SNORA40.2-201ENST00000390847 128 ntBASIC4□□□□□ -1.77
CDH3P22223 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDH3P22223 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4□□□□□ -1.77
CDH3P22223 RNU2-37P-201ENST00000410695 177 ntBASIC4□□□□□ -1.77
CDH3P22223 AL356095.1-201ENST00000417217 199 ntBASIC4□□□□□ -1.77
CDH3P22223 AL356320.2-201ENST00000417263 507 ntBASIC4□□□□□ -1.77
CDH3P22223 Z75741.2-201ENST00000417272 1167 ntBASIC4□□□□□ -1.77
CDH3P22223 RPL17P36-201ENST00000420302 549 ntBASIC4□□□□□ -1.77
CDH3P22223 AL513175.2-201ENST00000422071 443 ntBASIC4□□□□□ -1.77
CDH3P22223 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4□□□□□ -1.77
CDH3P22223 RPF2P1-201ENST00000424137 906 ntBASIC4□□□□□ -1.77
CDH3P22223 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4□□□□□ -1.77
CDH3P22223 BMS1P19-201ENST00000433925 393 ntBASIC4□□□□□ -1.77
CDH3P22223 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms